This page shows detailed deep learning-derived predictions and motifs for CTCF in upper lobe of left lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000702.1 |
| Cell line/tissue: | upper lobe of left lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR970UZD |
| Model: | BPNet |
| A [ | -3.99e-04 | -1.29e-03 | -1.65e-03 | -2.86e-04 | -3.09e-04 | 2.88e-03 | -2.27e-04 | -1.66e-04 | -1.14e-03 | 1.30e-02 | -9.99e-04 | -3.27e-03 | -2.13e-04 | -1.46e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.90e-03 | 3.05e-02 | -7.92e-05 | 5.82e-02 | 9.15e-02 | 3.20e-02 | 4.44e-02 | 1.08e-01 | 3.65e-04 | -1.46e-03 | 7.57e-03 | 5.57e-03 | -9.26e-05 | -8.50e-04 | ] |
| G [ | 1.50e-02 | -2.61e-04 | 5.26e-02 | 2.63e-04 | -6.53e-05 | 7.52e-05 | -9.65e-06 | -2.16e-05 | -1.06e-04 | 9.44e-03 | 4.22e-02 | -6.47e-04 | 1.19e-01 | 6.24e-02 | ] |
| T [ | -1.42e-03 | 5.76e-03 | -1.19e-03 | -6.55e-04 | -4.14e-04 | -1.66e-03 | 1.21e-02 | -2.48e-04 | 5.11e-02 | -2.61e-03 | -8.77e-04 | 2.24e-02 | -3.32e-04 | -1.02e-03 | ] |
| A [ | 2200 | 1167 | 1863 | 1635 | 106 | 7976 | 179 | 97 | 1255 | 7882 | 585 | 2933 | 66 | 979 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7840 | 13163 | 899 | 21028 | 24261 | 13483 | 16442 | 24201 | 2075 | 2402 | 8115 | 4726 | 94 | 1158 | ] |
| G [ | 12013 | 1478 | 18402 | 1163 | 60 | 1634 | 227 | 58 | 1110 | 10604 | 14684 | 1124 | 24177 | 20816 | ] |
| T [ | 2495 | 8740 | 3384 | 722 | 121 | 1455 | 7700 | 192 | 20109 | 3659 | 1164 | 15765 | 211 | 1595 | ] |
