This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000705.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR813KUE |
| Model: | BPNet |
| A [ | -1.80e-03 | -4.12e-03 | -3.64e-03 | -9.33e-05 | -4.93e-04 | 1.06e-02 | -4.91e-04 | -3.19e-04 | -2.71e-03 | 2.12e-02 | -2.27e-03 | -5.87e-03 | -7.18e-04 | -3.36e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.38e-02 | 5.95e-02 | -1.19e-03 | 1.26e-01 | 1.90e-01 | 5.88e-02 | 7.21e-02 | 1.90e-01 | 2.50e-04 | -2.14e-03 | 1.11e-02 | 7.66e-03 | -3.78e-04 | -2.01e-03 | ] |
| G [ | 3.75e-02 | -9.49e-04 | 1.09e-01 | -2.99e-04 | -5.72e-07 | 1.04e-04 | 9.32e-06 | -4.11e-05 | -3.11e-05 | 1.39e-02 | 6.68e-02 | -5.42e-04 | 1.79e-01 | 9.18e-02 | ] |
| T [ | -3.31e-03 | 1.29e-02 | -3.71e-03 | -1.36e-03 | -7.34e-04 | -4.12e-03 | 2.40e-02 | -3.67e-04 | 7.99e-02 | -4.99e-03 | -2.16e-03 | 2.85e-02 | -9.35e-04 | -1.89e-03 | ] |
| A [ | 4087 | 2045 | 3251 | 3447 | 221 | 15198 | 401 | 226 | 2572 | 15357 | 1433 | 5359 | 226 | 2934 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 13205 | 19454 | 1140 | 35141 | 40233 | 22152 | 23197 | 40239 | 3337 | 3397 | 13929 | 6289 | 178 | 2829 | ] |
| G [ | 19788 | 1933 | 31091 | 1462 | 69 | 1617 | 454 | 71 | 1456 | 15507 | 23116 | 1896 | 39838 | 31058 | ] |
| T [ | 3904 | 17552 | 5502 | 934 | 461 | 2017 | 16932 | 448 | 33620 | 6723 | 2505 | 27439 | 742 | 4162 | ] |
