This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000708.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR763VUL |
| Model: | BPNet |
| A [ | -2.09e-03 | -9.18e-04 | 2.58e-02 | -1.68e-03 | -5.54e-03 | 7.31e-02 | -4.02e-04 | 2.16e-02 | -4.00e-03 | -6.42e-04 | -1.44e-03 | -3.94e-03 | 1.11e-02 | -3.39e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.29e-02 | 1.81e-01 | -6.04e-04 | 6.15e-02 | 1.65e-02 | -5.92e-05 | -2.85e-05 | 2.69e-05 | 2.80e-04 | -7.60e-06 | -8.52e-05 | 1.08e-01 | -1.06e-03 | 3.63e-02 | ] |
| G [ | -1.73e-03 | -3.43e-04 | 7.67e-03 | 1.33e-02 | -1.82e-03 | 7.07e-04 | 1.86e-01 | 6.94e-02 | 5.86e-02 | 1.84e-01 | 1.27e-01 | -9.21e-04 | 6.17e-02 | 1.59e-02 | ] |
| T [ | -3.37e-03 | -5.99e-04 | -6.32e-03 | -2.27e-03 | 1.86e-02 | -2.50e-03 | -2.61e-04 | -4.89e-04 | 8.43e-03 | -5.03e-04 | -3.77e-04 | -3.63e-03 | -3.83e-03 | -1.75e-03 | ] |
| A [ | 4062 | 182 | 27908 | 2491 | 6581 | 33731 | 283 | 16332 | 2193 | 481 | 978 | 5759 | 17082 | 3972 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 31210 | 40833 | 1983 | 22585 | 15980 | 1396 | 40 | 580 | 1814 | 98 | 1602 | 30579 | 1996 | 19880 | ] |
| G [ | 2856 | 28 | 5648 | 14652 | 3579 | 3261 | 40638 | 23756 | 22346 | 40191 | 35039 | 1372 | 19951 | 13079 | ] |
| T [ | 2959 | 43 | 5548 | 1358 | 14947 | 2699 | 125 | 418 | 14733 | 316 | 3467 | 3376 | 2057 | 4155 | ] |
