This page shows detailed deep learning-derived predictions and motifs for CTCF in nephron using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000713.1 |
| Cell line/tissue: | nephron |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR194WQV |
| Model: | BPNet |
| A [ | -1.63e-03 | -3.02e-03 | -2.68e-03 | -4.07e-04 | -3.84e-04 | 5.82e-03 | -4.95e-04 | -2.54e-04 | -2.11e-03 | 1.70e-02 | -1.94e-03 | -5.04e-03 | -5.29e-04 | -2.79e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.03e-02 | 4.82e-02 | -1.09e-03 | 1.01e-01 | 1.53e-01 | 4.78e-02 | 6.37e-02 | 1.64e-01 | 3.19e-04 | -2.39e-03 | 1.21e-02 | 6.16e-03 | -3.61e-04 | -1.85e-03 | ] |
| G [ | 2.96e-02 | -7.10e-04 | 8.03e-02 | -3.50e-04 | -6.80e-05 | -2.01e-04 | -1.30e-04 | -4.79e-05 | -2.69e-04 | 1.62e-02 | 5.66e-02 | -5.36e-04 | 1.63e-01 | 8.33e-02 | ] |
| T [ | -2.67e-03 | 7.42e-03 | -2.77e-03 | -9.99e-04 | -5.88e-04 | -3.72e-03 | 1.74e-02 | -3.51e-04 | 7.54e-02 | -4.70e-03 | -1.93e-03 | 2.27e-02 | -7.74e-04 | -1.47e-03 | ] |
| A [ | 3517 | 1963 | 3085 | 2924 | 273 | 13411 | 347 | 155 | 2051 | 13039 | 1178 | 4903 | 49 | 2404 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11203 | 18063 | 1065 | 31990 | 35889 | 19606 | 21346 | 36152 | 2748 | 3000 | 12905 | 4962 | 53 | 2301 | ] |
| G [ | 18134 | 1868 | 27045 | 1043 | 98 | 1473 | 302 | 82 | 1123 | 14874 | 20455 | 1631 | 36388 | 28418 | ] |
| T [ | 3826 | 14785 | 5485 | 722 | 420 | 2191 | 14685 | 291 | 30758 | 5767 | 2143 | 25184 | 190 | 3557 | ] |
