This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000716.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR778NDP |
| Model: | BPNet |
| A [ | -1.87e-03 | -3.98e-03 | -3.75e-03 | -4.96e-04 | -4.71e-04 | 8.49e-03 | -6.07e-04 | -4.09e-04 | -2.90e-03 | 2.20e-02 | -2.49e-03 | -6.08e-03 | -7.30e-04 | -3.69e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.53e-02 | 6.55e-02 | -1.37e-03 | 1.36e-01 | 1.92e-01 | 6.05e-02 | 7.55e-02 | 2.03e-01 | 7.91e-04 | -1.93e-03 | 1.50e-02 | 8.68e-03 | -3.53e-04 | -1.62e-03 | ] |
| G [ | 4.12e-02 | -9.44e-04 | 1.14e-01 | -5.77e-04 | -2.29e-05 | 3.98e-04 | -4.75e-05 | -3.86e-05 | 3.25e-05 | 1.62e-02 | 6.48e-02 | -7.87e-04 | 1.90e-01 | 9.42e-02 | ] |
| T [ | -3.68e-03 | 1.13e-02 | -4.11e-03 | -1.31e-03 | -7.92e-04 | -4.25e-03 | 2.53e-02 | -4.94e-04 | 8.30e-02 | -6.22e-03 | -2.17e-03 | 2.96e-02 | -8.96e-04 | -1.75e-03 | ] |
| A [ | 3195 | 1617 | 2770 | 2683 | 245 | 13634 | 254 | 137 | 2161 | 13019 | 1237 | 4827 | 84 | 2562 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11274 | 17594 | 826 | 31920 | 35092 | 18890 | 20478 | 35384 | 2737 | 3017 | 12882 | 4564 | 117 | 2392 | ] |
| G [ | 18052 | 1313 | 27499 | 695 | 63 | 1406 | 274 | 39 | 1082 | 14016 | 19537 | 1577 | 35364 | 27194 | ] |
| T [ | 3297 | 15294 | 4723 | 520 | 418 | 1888 | 14812 | 258 | 29838 | 5766 | 2161 | 24850 | 253 | 3670 | ] |
