This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000724.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR270KFY |
| Model: | BPNet |
| A [ | -2.23e-03 | -8.92e-04 | 2.63e-02 | -2.00e-03 | -6.19e-03 | 7.50e-02 | -4.58e-04 | 1.89e-02 | -4.56e-03 | -7.67e-04 | -1.67e-03 | -4.25e-03 | 9.12e-03 | -3.76e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.38e-02 | 1.89e-01 | -6.26e-04 | 6.54e-02 | 1.84e-02 | -2.43e-05 | -3.30e-05 | -5.01e-07 | 4.86e-04 | 3.51e-06 | 2.41e-04 | 1.14e-01 | -8.66e-04 | 3.75e-02 | ] |
| G [ | -1.60e-03 | -3.42e-04 | 8.81e-03 | 1.59e-02 | -1.98e-03 | 1.33e-03 | 1.94e-01 | 7.17e-02 | 5.79e-02 | 1.84e-01 | 1.29e-01 | -8.48e-04 | 6.17e-02 | 1.35e-02 | ] |
| T [ | -3.01e-03 | -6.70e-04 | -7.11e-03 | -2.48e-03 | 1.94e-02 | -2.76e-03 | -3.43e-04 | -4.82e-04 | 6.52e-03 | -5.37e-04 | -7.31e-04 | -3.92e-03 | -3.99e-03 | -1.57e-03 | ] |
| A [ | 4565 | 733 | 29237 | 2971 | 7179 | 35786 | 410 | 17424 | 2625 | 620 | 1222 | 6159 | 18730 | 4430 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 33576 | 43561 | 2257 | 24469 | 16943 | 1757 | 66 | 691 | 2208 | 141 | 1956 | 33335 | 2416 | 20794 | ] |
| G [ | 3276 | 177 | 6890 | 15626 | 4029 | 4013 | 43952 | 25994 | 24333 | 43504 | 37752 | 1563 | 21085 | 14644 | ] |
| T [ | 3240 | 186 | 6274 | 1591 | 16507 | 3102 | 229 | 549 | 15492 | 392 | 3727 | 3600 | 2426 | 4790 | ] |
