Detailed information of deep learning profile BP000725.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM12892 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000725.1
Cell line/tissue: GM12892
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Best Match(es): MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR000EAN
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.20e-04 -6.44e-06 -1.64e-05 1.08e-02 1.32e-02 2.21e-03 -9.66e-05 -3.43e-04 -7.87e-05 -3.22e-04 -2.71e-03 ]
C [ 2.47e-05 3.55e-06 -4.37e-06 -6.52e-04 -2.21e-03 -6.22e-04 -1.69e-04 8.22e-03 6.32e-02 5.85e-02 1.40e-02 ]
G [ 5.07e-02 8.15e-02 5.99e-02 1.92e-02 -3.04e-04 -4.26e-04 -1.79e-04 -5.53e-04 -9.44e-07 -1.75e-06 5.20e-04 ]
T [ -6.19e-04 -1.17e-05 7.93e-04 -8.48e-04 3.62e-04 3.57e-02 5.40e-02 2.68e-02 3.07e-05 -3.58e-04 -2.74e-03 ]

Frequency matrix

A [ 676 30 287 4245 4885 1765 276 630 205 330 3358 ]
C [ 660 62 102 876 3294 819 611 4028 12005 11425 5181 ]
G [ 9742 12207 10562 6262 2205 837 696 568 14 145 1735 ]
T [ 1381 161 1509 1077 2075 9039 10877 7234 236 560 2186 ]

7 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000234.1 RELA ENCSR000EBD GM18951 Homo sapiens
BP000324.1 RELA ENCSR000EAI GM12891 Homo sapiens
BP000338.1 RELA ENCSR000EBM GM19193 Homo sapiens
BP000357.1 RELA ENCSR000EAG GM12878 Homo sapiens
BP000485.1 RELA ENCSR580HOI HepG2 Homo sapiens
BP000574.1 RELA ENCSR000EAQ GM15510 Homo sapiens
BP000749.1 RELA ENCSR664POU GM12878 Homo sapiens
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