Detailed information of deep learning profile BP000725.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM12892 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000725.1
Cell line/tissue: GM12892
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Best Match(es): MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR000EAN
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.74e-03 -3.58e-04 3.07e-05 2.68e-02 5.40e-02 3.57e-02 3.62e-04 -8.48e-04 7.93e-04 -1.17e-05 -6.19e-04 ]
C [ 5.20e-04 -1.75e-06 -9.44e-07 -5.53e-04 -1.79e-04 -4.26e-04 -3.04e-04 1.92e-02 5.99e-02 8.15e-02 5.07e-02 ]
G [ 1.40e-02 5.85e-02 6.32e-02 8.22e-03 -1.69e-04 -6.22e-04 -2.21e-03 -6.52e-04 -4.37e-06 3.55e-06 2.47e-05 ]
T [ -2.71e-03 -3.22e-04 -7.87e-05 -3.43e-04 -9.66e-05 2.21e-03 1.32e-02 1.08e-02 -1.64e-05 -6.44e-06 -4.20e-04 ]

Frequency matrix

A [ 2186 560 236 7234 10877 9039 2075 1077 1509 161 1381 ]
C [ 1735 145 14 568 696 837 2205 6262 10562 12207 9742 ]
G [ 5181 11425 12005 4028 611 819 3294 876 102 62 660 ]
T [ 3358 330 205 630 276 1765 4885 4245 287 30 676 ]

7 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000234.1 RELA ENCSR000EBD GM18951 Homo sapiens
BP000324.1 RELA ENCSR000EAI GM12891 Homo sapiens
BP000338.1 RELA ENCSR000EBM GM19193 Homo sapiens
BP000357.1 RELA ENCSR000EAG GM12878 Homo sapiens
BP000485.1 RELA ENCSR580HOI HepG2 Homo sapiens
BP000574.1 RELA ENCSR000EAQ GM15510 Homo sapiens
BP000749.1 RELA ENCSR664POU GM12878 Homo sapiens
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