This page shows detailed deep learning-derived predictions and motifs for CTCF in heart right ventricle using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000727.1 |
| Cell line/tissue: | heart right ventricle |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR840EYN |
| Model: | BPNet |
| A [ | -1.64e-03 | -7.32e-04 | 2.91e-02 | -1.69e-03 | -4.86e-03 | 7.92e-02 | -3.76e-04 | 1.82e-02 | -3.06e-03 | -7.56e-04 | -1.21e-03 | -2.31e-03 | 8.42e-03 | -2.77e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.43e-02 | 1.78e-01 | -8.90e-04 | 6.22e-02 | 1.69e-02 | -2.06e-04 | -4.70e-05 | -6.30e-05 | 1.68e-05 | -4.19e-05 | 2.26e-04 | 8.31e-02 | -3.38e-04 | 2.89e-02 | ] |
| G [ | -1.78e-03 | -2.53e-04 | 7.93e-03 | 1.18e-02 | -2.46e-03 | 6.67e-04 | 1.74e-01 | 6.70e-02 | 4.96e-02 | 1.63e-01 | 1.05e-01 | -3.67e-04 | 5.23e-02 | 1.26e-02 | ] |
| T [ | -2.94e-03 | -4.77e-04 | -5.37e-03 | -1.71e-03 | 1.94e-02 | -2.13e-03 | -1.85e-04 | -4.90e-04 | 4.55e-03 | -4.64e-04 | -7.66e-04 | -3.04e-03 | -3.07e-03 | -1.70e-03 | ] |
| A [ | 2561 | 419 | 20614 | 1354 | 4422 | 25273 | 157 | 12166 | 1303 | 126 | 626 | 4142 | 12351 | 2943 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 23656 | 28743 | 1007 | 17747 | 12072 | 783 | 29 | 219 | 998 | 17 | 936 | 22134 | 1353 | 14367 | ] |
| G [ | 1487 | 87 | 4322 | 9555 | 2064 | 1992 | 29108 | 16728 | 16510 | 29173 | 25599 | 747 | 14280 | 9454 | ] |
| T [ | 1678 | 133 | 3439 | 726 | 10824 | 1334 | 88 | 269 | 10571 | 66 | 2221 | 2360 | 1398 | 2618 | ] |
