Detailed information of deep learning profile BP000728.1

This page shows detailed deep learning-derived predictions and motifs for REST in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000728.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR663WAR
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.01e-04 -1.12e-03 1.47e-02 -7.52e-04 1.07e-06 -2.92e-05 -1.68e-04 1.31e-05 6.28e-05 9.42e-06 2.97e-02 -7.89e-04 -1.31e-03 4.83e-04 -1.23e-03 ]
C [ -1.98e-04 1.83e-03 1.85e-02 -3.76e-04 1.52e-01 1.03e-07 9.43e-04 -6.17e-05 1.59e-01 1.40e-01 -2.85e-04 7.51e-04 1.42e-02 -3.30e-04 7.00e-03 ]
G [ 5.06e-02 4.47e-02 -1.11e-04 7.26e-02 7.82e-07 2.03e-05 8.74e-02 1.33e-04 0.00e+00 4.42e-04 2.68e-03 1.59e-02 1.94e-02 3.77e-02 5.26e-03 ]
T [ -8.71e-04 -2.54e-04 -4.93e-04 -1.60e-03 -5.40e-06 1.19e-01 -1.96e-06 9.81e-02 -1.25e-06 -1.04e-05 -1.45e-03 3.10e-04 1.01e-04 3.49e-04 2.34e-02 ]

Frequency matrix

A [ 518 195 1443 431 3 40 139 98 5 10 2247 857 434 495 317 ]
C [ 113 711 1294 192 3678 23 377 43 3646 3638 407 588 836 521 695 ]
G [ 2759 2338 91 2702 4 19 3108 163 0 15 543 1055 1982 2228 534 ]
T [ 311 457 873 376 16 3619 77 3397 50 38 504 1201 449 457 2155 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
Showing 10 profiles of page 2 from 3 pages