Detailed information of deep learning profile BP000728.1

This page shows detailed deep learning-derived predictions and motifs for REST in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000728.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR663WAR
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.01e-04 -1.12e-03 1.47e-02 -7.52e-04 1.07e-06 -2.92e-05 -1.68e-04 1.31e-05 6.28e-05 9.42e-06 2.97e-02 -7.89e-04 -1.31e-03 4.83e-04 -1.23e-03 ]
C [ -1.98e-04 1.83e-03 1.85e-02 -3.76e-04 1.52e-01 1.03e-07 9.43e-04 -6.17e-05 1.59e-01 1.40e-01 -2.85e-04 7.51e-04 1.42e-02 -3.30e-04 7.00e-03 ]
G [ 5.06e-02 4.47e-02 -1.11e-04 7.26e-02 7.82e-07 2.03e-05 8.74e-02 1.33e-04 0.00e+00 4.42e-04 2.68e-03 1.59e-02 1.94e-02 3.77e-02 5.26e-03 ]
T [ -8.71e-04 -2.54e-04 -4.93e-04 -1.60e-03 -5.40e-06 1.19e-01 -1.96e-06 9.81e-02 -1.25e-06 -1.04e-05 -1.45e-03 3.10e-04 1.01e-04 3.49e-04 2.34e-02 ]

Frequency matrix

A [ 518 195 1443 431 3 40 139 98 5 10 2247 857 434 495 317 ]
C [ 113 711 1294 192 3678 23 377 43 3646 3638 407 588 836 521 695 ]
G [ 2759 2338 91 2702 4 19 3108 163 0 15 543 1055 1982 2228 534 ]
T [ 311 457 873 376 16 3619 77 3397 50 38 504 1201 449 457 2155 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000383.1 REST ENCSR867WPH liver Homo sapiens
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages