Detailed information of deep learning profile BP000728.1

This page shows detailed deep learning-derived predictions and motifs for REST in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000728.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR663WAR
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.34e-02 3.49e-04 1.01e-04 3.10e-04 -1.45e-03 -1.04e-05 -1.25e-06 9.81e-02 -1.96e-06 1.19e-01 -5.40e-06 -1.60e-03 -4.93e-04 -2.54e-04 -8.71e-04 ]
C [ 5.26e-03 3.77e-02 1.94e-02 1.59e-02 2.68e-03 4.42e-04 0.00e+00 1.33e-04 8.74e-02 2.03e-05 7.82e-07 7.26e-02 -1.11e-04 4.47e-02 5.06e-02 ]
G [ 7.00e-03 -3.30e-04 1.42e-02 7.51e-04 -2.85e-04 1.40e-01 1.59e-01 -6.17e-05 9.43e-04 1.03e-07 1.52e-01 -3.76e-04 1.85e-02 1.83e-03 -1.98e-04 ]
T [ -1.23e-03 4.83e-04 -1.31e-03 -7.89e-04 2.97e-02 9.42e-06 6.28e-05 1.31e-05 -1.68e-04 -2.92e-05 1.07e-06 -7.52e-04 1.47e-02 -1.12e-03 -1.01e-04 ]

Frequency matrix

A [ 2155 457 449 1201 504 38 50 3397 77 3619 16 376 873 457 311 ]
C [ 534 2228 1982 1055 543 15 0 163 3108 19 4 2702 91 2338 2759 ]
G [ 695 521 836 588 407 3638 3646 43 377 23 3678 192 1294 711 113 ]
T [ 317 495 434 857 2247 10 5 98 139 40 3 431 1443 195 518 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages