Detailed information of deep learning profile BP000734.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000734.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR686PFM
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.80e-03 -7.67e-04 2.60e-03 3.78e-02 -1.77e-05 1.25e-02 -4.75e-04 2.81e-03 3.67e-03 -3.05e-04 -5.24e-06 -8.04e-05 2.13e-03 -9.49e-06 ]
C [ -1.98e-05 -2.30e-04 -9.87e-04 -3.52e-04 5.83e-02 -1.15e-03 -9.34e-05 -1.15e-03 3.83e-04 8.43e-04 -1.42e-05 -1.17e-04 -1.33e-03 4.76e-02 ]
G [ 3.84e-03 3.21e-02 -9.23e-04 -3.27e-04 -9.93e-05 1.85e-03 2.68e-03 -1.46e-03 5.15e-04 -9.99e-05 6.81e-02 -6.11e-06 -9.43e-04 -2.14e-06 ]
T [ -1.26e-03 -5.85e-04 1.35e-03 -4.22e-04 5.52e-05 -2.06e-03 1.60e-03 2.57e-03 -5.52e-04 2.28e-02 0.00e+00 4.52e-02 4.54e-03 -3.80e-07 ]

Frequency matrix

A [ 4500 1913 3894 8107 0 6844 2016 3308 3366 1534 7 430 2615 372 ]
C [ 671 358 1832 589 10700 689 2571 1960 2765 522 1 164 2099 9791 ]
G [ 3611 6626 2318 678 2 751 3185 2115 2582 213 10694 65 1340 41 ]
T [ 1921 1805 2659 1328 0 2418 2931 3319 1990 8434 0 10043 4648 498 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages