This page shows detailed deep learning-derived predictions and motifs for CTCF in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000735.1 |
| Cell line/tissue: | HepG2 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000BIE |
| Model: | BPNet |
| A [ | -1.17e-03 | -1.08e-03 | 1.58e-02 | -9.39e-04 | -3.37e-03 | 4.93e-02 | -3.11e-04 | 8.85e-03 | -4.06e-03 | -7.97e-04 | -1.40e-03 | -2.82e-03 | 4.03e-03 | -2.11e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 5.73e-02 | 1.17e-01 | 1.34e-04 | 3.61e-02 | 1.12e-02 | -3.36e-04 | -9.21e-05 | -1.93e-04 | -3.35e-04 | -1.01e-04 | 5.64e-04 | 6.19e-02 | 1.15e-04 | 2.61e-02 | ] |
| G [ | -1.45e-03 | -4.51e-04 | 4.70e-03 | 9.52e-03 | -1.58e-03 | 4.46e-04 | 1.26e-01 | 5.68e-02 | 4.07e-02 | 1.18e-01 | 7.48e-02 | -3.01e-04 | 3.92e-02 | 6.51e-03 | ] |
| T [ | -1.82e-03 | -8.05e-04 | -4.00e-03 | -1.65e-03 | 1.36e-02 | -1.43e-03 | -3.40e-04 | -5.01e-04 | 4.11e-03 | -4.85e-04 | -3.00e-04 | -2.33e-03 | -2.75e-03 | -6.16e-04 | ] |
| A [ | 7424 | 1134 | 47249 | 5327 | 11999 | 59145 | 874 | 25399 | 6320 | 1355 | 2876 | 12750 | 27407 | 8016 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 57865 | 74518 | 4975 | 39675 | 30893 | 2499 | 255 | 703 | 3188 | 461 | 4821 | 52341 | 6637 | 37542 | ] |
| G [ | 5738 | 322 | 10555 | 28406 | 8026 | 8357 | 74656 | 49084 | 42289 | 73297 | 61858 | 4047 | 36927 | 21258 | ] |
| T [ | 5286 | 340 | 13536 | 2906 | 25396 | 6312 | 529 | 1127 | 24517 | 1201 | 6759 | 7176 | 5343 | 9497 | ] |