This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000738.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DTO |
| Model: | BPNet |
| A [ | -1.83e-03 | -1.09e-03 | 2.24e-02 | -6.06e-04 | -4.14e-03 | 7.04e-02 | -3.47e-04 | 8.02e-03 | -4.56e-03 | -9.61e-04 | -1.99e-03 | -2.33e-03 | 5.57e-03 | -2.34e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.57e-02 | 1.50e-01 | 5.37e-04 | 4.98e-02 | 1.31e-02 | -3.88e-04 | -3.20e-05 | -1.92e-04 | -4.85e-04 | -6.82e-05 | 2.65e-03 | 6.06e-02 | 8.57e-04 | 2.34e-02 | ] |
| G [ | -1.50e-03 | -5.30e-04 | 4.32e-03 | 1.01e-02 | -1.83e-03 | 1.08e-03 | 1.58e-01 | 7.53e-02 | 5.35e-02 | 1.34e-01 | 8.00e-02 | 8.48e-04 | 4.08e-02 | 7.14e-03 | ] |
| T [ | -2.10e-03 | -8.09e-04 | -4.35e-03 | -1.90e-03 | 2.13e-02 | -1.90e-03 | -3.33e-04 | -6.95e-04 | 1.69e-03 | -8.87e-04 | -8.18e-04 | -2.87e-03 | -2.92e-03 | -4.68e-04 | ] |
| A [ | 5787 | 2008 | 41456 | 4648 | 9563 | 53060 | 453 | 20611 | 5522 | 1487 | 3408 | 11827 | 23371 | 7968 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 51517 | 61774 | 3701 | 35789 | 26124 | 1463 | 102 | 555 | 2353 | 1101 | 5451 | 41736 | 6417 | 29940 | ] |
| G [ | 3835 | 503 | 8258 | 22281 | 5173 | 5952 | 63977 | 42551 | 37686 | 60666 | 50260 | 4469 | 30053 | 18398 | ] |
| T [ | 3709 | 564 | 11433 | 2130 | 23987 | 4373 | 316 | 1131 | 19286 | 1594 | 5728 | 6816 | 5007 | 8542 | ] |