Detailed information of deep learning profile BP000742.1

This page shows detailed deep learning-derived predictions and motifs for MEF2B in GM12878 using a single trained BPNet model.

Model details

Name: MEF2B
Model ID: BP000742.1
Cell line/tissue: GM12878
Class: MADS box factors
Family: Regulators of differentiation
Best Match(es): MA0660.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02080  
Source: ENCSR177VFS
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.53e-04 -4.01e-04 -8.02e-06 2.15e-02 8.12e-04 9.12e-04 2.94e-04 2.68e-03 -5.28e-04 2.00e-02 -2.45e-04 3.42e-04 ]
C [ -4.72e-04 1.88e-02 2.70e-04 -2.64e-07 -9.53e-05 -2.28e-04 -3.05e-04 -3.39e-04 -2.46e-04 -9.79e-06 -2.16e-04 4.15e-03 ]
G [ 4.01e-03 -2.62e-04 0.00e+00 -4.17e-05 -4.90e-05 -2.31e-04 -2.60e-05 -1.00e-04 -1.31e-04 4.79e-05 1.73e-02 -4.86e-04 ]
T [ 5.74e-04 3.29e-05 2.46e-02 -1.88e-04 1.42e-02 1.21e-02 1.37e-02 7.57e-03 1.37e-02 -2.13e-05 -6.35e-04 -5.81e-04 ]

Frequency matrix

A [ 2542 816 11 13331 1964 2192 1661 4200 1806 14215 2238 4881 ]
C [ 1578 10108 507 114 154 222 801 531 855 13 700 4633 ]
G [ 4854 958 8 232 114 284 95 223 734 211 9969 1787 ]
T [ 5504 2596 13952 801 12246 11780 11921 9524 11083 39 1571 3177 ]