This page shows detailed deep learning-derived predictions and motifs for CTCF in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000743.1 |
| Cell line/tissue: | MCF-7 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DMS |
| Model: | BPNet |
| A [ | -1.53e-03 | -3.12e-03 | -2.38e-03 | -1.22e-03 | -6.36e-04 | 4.68e-03 | -6.51e-04 | -3.88e-04 | -1.99e-03 | 1.20e-02 | -1.88e-03 | -5.02e-03 | -9.26e-04 | -2.59e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.00e-02 | 4.19e-02 | 1.11e-04 | 8.59e-02 | 1.28e-01 | 4.12e-02 | 6.22e-02 | 1.37e-01 | 1.42e-03 | -7.11e-04 | 1.27e-02 | 4.87e-03 | -3.57e-04 | -6.37e-04 | ] |
| G [ | 2.79e-02 | 7.93e-04 | 6.94e-02 | 1.48e-03 | 3.52e-05 | -1.63e-04 | -1.58e-04 | -6.19e-05 | -1.07e-04 | 1.22e-02 | 4.15e-02 | 1.09e-03 | 1.28e-01 | 6.80e-02 | ] |
| T [ | -2.75e-03 | 5.21e-03 | -3.85e-03 | -1.62e-03 | -8.07e-04 | -4.77e-03 | 7.74e-03 | -4.36e-04 | 4.37e-02 | -4.06e-03 | -1.67e-03 | 1.52e-02 | -1.31e-03 | -2.43e-03 | ] |
| A [ | 8349 | 4893 | 6030 | 6197 | 914 | 23010 | 1059 | 106 | 5939 | 23538 | 2606 | 12579 | 6 | 4364 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 18520 | 30529 | 2575 | 52998 | 63859 | 35467 | 40882 | 65743 | 6629 | 6453 | 25286 | 6543 | 5 | 4348 | ] |
| G [ | 32024 | 5059 | 45980 | 4236 | 249 | 2152 | 560 | 42 | 1619 | 24796 | 33952 | 2816 | 66060 | 50886 | ] |
| T [ | 7195 | 25607 | 11503 | 2657 | 1066 | 5458 | 23587 | 197 | 51901 | 11301 | 4244 | 44150 | 17 | 6490 | ] |
