Detailed information of deep learning profile BP000745.1

This page shows detailed deep learning-derived predictions and motifs for GATA2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GATA2
Model ID: BP000745.1
Cell line/tissue: HepG2
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Best Match(es): MA0036.1 MA0036.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P23769  
Source: ENCSR897LDT
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.36e-04 -7.15e-05 1.82e-04 7.58e-02 3.77e-06 6.70e-05 3.09e-03 ]
C [ 8.35e-03 2.76e-05 -1.92e-05 0.00e+00 0.00e+00 6.40e-02 -8.54e-05 ]
G [ 2.63e-03 -1.50e-04 3.31e-04 0.00e+00 0.00e+00 0.00e+00 6.40e-05 ]
T [ -3.36e-04 2.69e-02 3.13e-02 4.85e-06 6.92e-02 8.16e-08 1.37e-02 ]

Frequency matrix

A [ 8821 6773 9288 51880 320 81 15461 ]
C [ 18213 8726 3934 5 43 51635 1192 ]
G [ 12258 3119 6245 55 66 59 1990 ]
T [ 12658 33333 32485 11 51522 176 33307 ]

6 profiles found for the same TF (GATA2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000483.1 GATA2 ENCSR000EYB SH-SY5Y Homo sapiens
BP000642.1 GATA2 ENCSR257RKC K562 Homo sapiens
BP000755.1 GATA2 ENCSR000EWG K562 Homo sapiens
BP000812.1 GATA2 ENCSR706VOO SK-N-SH Homo sapiens
BP001047.1 GATA2 ENCSR000DKA K562 Homo sapiens
BP001194.1 GATA2 ENCSR000BKM K562 Homo sapiens
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