This page shows detailed deep learning-derived predictions and motifs for CTCF in GM20000 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000746.1 |
| Cell line/tissue: | GM20000 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DLG |
| Model: | BPNet |
| A [ | -1.51e-03 | -3.31e-03 | -3.56e-03 | -7.27e-04 | -5.19e-04 | 5.16e-03 | -4.65e-04 | -3.46e-04 | -2.26e-03 | 2.05e-02 | -2.10e-03 | -5.49e-03 | -7.26e-04 | -2.56e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.36e-02 | 6.85e-02 | -8.47e-04 | 1.19e-01 | 1.82e-01 | 5.27e-02 | 7.71e-02 | 1.88e-01 | 2.64e-04 | -2.45e-03 | 1.26e-02 | 6.97e-03 | -3.91e-04 | -1.70e-03 | ] |
| G [ | 3.74e-02 | -9.22e-04 | 1.08e-01 | -2.38e-04 | -2.63e-05 | -3.13e-04 | -1.18e-04 | -8.06e-05 | -3.33e-04 | 1.42e-02 | 5.64e-02 | -3.74e-04 | 1.77e-01 | 8.82e-02 | ] |
| T [ | -3.77e-03 | 6.54e-03 | -4.13e-03 | -1.36e-03 | -6.99e-04 | -3.58e-03 | 1.80e-02 | -3.85e-04 | 7.76e-02 | -5.40e-03 | -1.26e-03 | 2.42e-02 | -9.96e-04 | -2.63e-03 | ] |
| A [ | 2362 | 1053 | 2195 | 1991 | 204 | 10416 | 225 | 94 | 1713 | 10481 | 923 | 4089 | 264 | 2079 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8861 | 16966 | 568 | 27371 | 29837 | 17370 | 18558 | 30103 | 2375 | 2858 | 11358 | 5069 | 335 | 2302 | ] |
| G [ | 16712 | 879 | 24213 | 570 | 68 | 1148 | 150 | 69 | 1004 | 12605 | 16180 | 1554 | 29116 | 23052 | ] |
| T [ | 2490 | 11528 | 3450 | 494 | 317 | 1492 | 11493 | 160 | 25333 | 4483 | 1965 | 19713 | 711 | 2993 | ] |
