This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000748.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR384KPP |
| Model: | BPNet |
| A [ | -2.15e-03 | -8.21e-04 | 2.31e-02 | -2.07e-03 | -4.21e-03 | 6.94e-02 | -3.98e-04 | 2.02e-02 | -3.34e-03 | -5.48e-04 | -1.16e-03 | -3.71e-03 | 9.66e-03 | -3.12e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.90e-02 | 1.50e-01 | -4.86e-04 | 5.34e-02 | 1.23e-02 | -2.32e-04 | -4.71e-05 | -1.62e-04 | -2.65e-04 | -2.83e-05 | 1.09e-04 | 9.03e-02 | -5.50e-04 | 3.32e-02 | ] |
| G [ | -1.58e-03 | -3.64e-04 | 4.94e-03 | 1.08e-02 | -1.88e-03 | 3.05e-04 | 1.60e-01 | 5.82e-02 | 4.92e-02 | 1.52e-01 | 1.02e-01 | -5.61e-04 | 5.34e-02 | 1.04e-02 | ] |
| T [ | -2.28e-03 | -6.29e-04 | -3.84e-03 | -1.65e-03 | 1.76e-02 | -2.03e-03 | -1.96e-04 | -3.96e-04 | 9.31e-03 | -3.43e-04 | -2.05e-05 | -2.85e-03 | -3.16e-03 | -1.03e-03 | ] |
| A [ | 3563 | 737 | 25183 | 2267 | 5801 | 31124 | 314 | 14934 | 1794 | 380 | 847 | 5079 | 15633 | 3495 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 28741 | 35932 | 1757 | 21221 | 14615 | 1056 | 62 | 287 | 1315 | 53 | 1208 | 28138 | 1584 | 18935 | ] |
| G [ | 2394 | 232 | 5451 | 12517 | 3070 | 2787 | 36647 | 21588 | 20392 | 36532 | 32097 | 1031 | 18256 | 11228 | ] |
| T [ | 2485 | 283 | 4793 | 1179 | 13698 | 2217 | 161 | 375 | 13682 | 219 | 3032 | 2936 | 1711 | 3526 | ] |