Detailed information of deep learning profile BP000749.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000749.1
Cell line/tissue: GM12878
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Best Match(es): MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR664POU
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.51e-03 -3.72e-04 2.96e-04 1.29e-02 2.35e-02 1.59e-02 2.24e-04 -3.85e-04 4.34e-04 -4.44e-06 -1.21e-04 ]
C [ 3.91e-04 -1.88e-05 -1.53e-05 -2.84e-04 -1.64e-04 -1.49e-04 -1.67e-04 9.97e-03 3.03e-02 4.13e-02 3.00e-02 ]
G [ 4.76e-03 2.62e-02 2.98e-02 3.54e-03 -6.16e-05 -2.44e-04 -4.38e-04 -2.24e-04 -9.74e-08 -1.59e-06 6.93e-06 ]
T [ -1.54e-03 -2.34e-04 -7.94e-05 -1.58e-04 -5.44e-05 1.87e-03 7.40e-03 5.57e-03 -2.31e-06 0.00e+00 -5.31e-05 ]

Frequency matrix

A [ 5315 2989 2970 14435 19686 15896 4727 2109 2233 185 1047 ]
C [ 4994 1363 389 1571 2475 2544 3761 12864 22792 25307 23305 ]
G [ 8166 19311 20724 7573 2246 2003 5778 1431 114 44 712 ]
T [ 7074 1885 1466 1970 1143 5106 11282 9146 410 13 485 ]

7 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000234.1 RELA ENCSR000EBD GM18951 Homo sapiens
BP000324.1 RELA ENCSR000EAI GM12891 Homo sapiens
BP000338.1 RELA ENCSR000EBM GM19193 Homo sapiens
BP000357.1 RELA ENCSR000EAG GM12878 Homo sapiens
BP000485.1 RELA ENCSR580HOI HepG2 Homo sapiens
BP000574.1 RELA ENCSR000EAQ GM15510 Homo sapiens
BP000725.1 RELA ENCSR000EAN GM12892 Homo sapiens
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