This page shows detailed deep learning-derived predictions and motifs for CTCF in stomach using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000750.1 |
| Cell line/tissue: | stomach |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR037GKL |
| Model: | BPNet |
| A [ | -6.85e-04 | -2.51e-03 | -2.49e-03 | -4.02e-04 | -3.89e-04 | 4.83e-03 | -3.46e-04 | -1.62e-04 | -1.60e-03 | 1.81e-02 | -1.37e-03 | -4.12e-03 | -4.37e-04 | -2.23e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.55e-03 | 4.38e-02 | -3.22e-04 | 8.86e-02 | 1.36e-01 | 4.07e-02 | 5.85e-02 | 1.45e-01 | 6.17e-06 | -2.07e-03 | 9.78e-03 | 6.43e-03 | -1.90e-04 | -1.42e-03 | ] |
| G [ | 2.50e-02 | -1.79e-04 | 7.43e-02 | 4.11e-04 | -3.78e-05 | -1.13e-04 | -5.84e-05 | -4.13e-05 | -2.01e-04 | 1.39e-02 | 5.37e-02 | -4.12e-04 | 1.44e-01 | 8.12e-02 | ] |
| T [ | -2.15e-03 | 8.44e-03 | -1.83e-03 | -1.04e-03 | -5.61e-04 | -2.57e-03 | 1.50e-02 | -3.08e-04 | 7.13e-02 | -4.46e-03 | -1.27e-03 | 2.46e-02 | -5.95e-04 | -1.63e-03 | ] |
| A [ | 2908 | 1461 | 2615 | 2339 | 218 | 11255 | 279 | 96 | 1530 | 11444 | 823 | 3672 | 177 | 1836 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9831 | 16263 | 964 | 27785 | 31287 | 17677 | 19207 | 31561 | 2023 | 2477 | 10774 | 5014 | 176 | 1829 | ] |
| G [ | 15959 | 1539 | 23901 | 1046 | 117 | 1373 | 271 | 72 | 938 | 13385 | 18585 | 1383 | 30973 | 25465 | ] |
| T [ | 3234 | 12669 | 4451 | 763 | 310 | 1628 | 12176 | 203 | 27441 | 4627 | 1750 | 21863 | 606 | 2801 | ] |
