This page shows detailed deep learning-derived predictions and motifs for CTCF in fibroblast of the aortic adventitia using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000754.1 |
| Cell line/tissue: | fibroblast of the aortic adventitia |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DPY |
| Model: | BPNet |
| A [ | -1.88e-03 | -1.30e-03 | 2.51e-02 | -1.75e-03 | -4.05e-03 | 7.76e-02 | -4.24e-04 | 1.19e-02 | -5.14e-03 | -1.18e-03 | -2.15e-03 | -2.48e-03 | 5.05e-03 | -3.20e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.53e-02 | 1.66e-01 | -6.47e-05 | 5.70e-02 | 1.61e-02 | -3.92e-04 | -1.00e-04 | -2.29e-04 | -8.99e-05 | -4.34e-05 | 1.51e-03 | 6.41e-02 | 7.79e-04 | 2.22e-02 | ] |
| G [ | -1.88e-03 | -3.69e-04 | 7.48e-03 | 1.08e-02 | -2.55e-03 | 1.17e-03 | 1.69e-01 | 7.49e-02 | 5.37e-02 | 1.44e-01 | 8.78e-02 | 5.77e-04 | 4.30e-02 | 8.60e-03 | ] |
| T [ | -2.69e-03 | -6.72e-04 | -5.41e-03 | -1.90e-03 | 1.96e-02 | -2.28e-03 | -3.71e-04 | -8.57e-04 | 1.02e-03 | -1.02e-03 | -1.21e-03 | -3.04e-03 | -3.27e-03 | -1.45e-04 | ] |
| A [ | 5205 | 1207 | 36382 | 3805 | 8950 | 46953 | 248 | 19916 | 5173 | 1117 | 2988 | 10934 | 20533 | 7370 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 45400 | 55786 | 2840 | 31649 | 23230 | 1680 | 33 | 683 | 2751 | 759 | 4545 | 36555 | 5396 | 25765 | ] |
| G [ | 3481 | 238 | 8871 | 20061 | 4780 | 5115 | 57066 | 35989 | 32684 | 54484 | 44940 | 3931 | 26971 | 16830 | ] |
| T [ | 3369 | 224 | 9362 | 1939 | 20495 | 3706 | 108 | 867 | 16847 | 1095 | 4983 | 6035 | 4555 | 7490 | ] |
