This page shows detailed deep learning-derived predictions and motifs for CTCF in HFF-Myc using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000757.1 |
| Cell line/tissue: | HFF-Myc |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DUM |
| Model: | BPNet |
| A [ | -1.07e-03 | -4.07e-03 | -3.90e-03 | -1.33e-03 | -8.62e-04 | 1.91e-03 | -6.29e-04 | -3.11e-04 | -2.63e-03 | 1.77e-02 | -2.44e-03 | -6.32e-03 | -9.64e-04 | -3.06e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.01e-02 | 5.55e-02 | 4.16e-05 | 1.07e-01 | 1.72e-01 | 6.11e-02 | 7.89e-02 | 1.87e-01 | 9.66e-04 | -2.11e-03 | 1.37e-02 | 6.90e-03 | -4.89e-04 | -1.75e-03 | ] |
| G [ | 3.32e-02 | 2.35e-04 | 8.48e-02 | 1.03e-03 | -2.12e-05 | -4.72e-04 | -1.40e-04 | -6.13e-05 | -3.18e-04 | 1.76e-02 | 6.03e-02 | -2.17e-04 | 1.79e-01 | 9.73e-02 | ] |
| T [ | -3.61e-03 | 6.05e-03 | -3.67e-03 | -2.05e-03 | -9.92e-04 | -5.35e-03 | 1.30e-02 | -4.63e-04 | 8.05e-02 | -5.82e-03 | -1.79e-03 | 2.43e-02 | -1.45e-03 | -2.57e-03 | ] |
| A [ | 5500 | 3194 | 4133 | 3997 | 706 | 14743 | 585 | 219 | 2927 | 17036 | 1460 | 7225 | 142 | 2567 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14174 | 21495 | 2447 | 37955 | 45056 | 26829 | 30573 | 46241 | 3961 | 3623 | 15721 | 6016 | 105 | 2546 | ] |
| G [ | 22000 | 3804 | 33085 | 2982 | 425 | 1678 | 380 | 83 | 1200 | 19132 | 27043 | 2356 | 45996 | 37986 | ] |
| T [ | 5254 | 18435 | 7263 | 1994 | 741 | 3677 | 15390 | 385 | 38839 | 7137 | 2704 | 31330 | 685 | 3829 | ] |
