This page shows detailed deep learning-derived predictions and motifs for CTCF in esophagus squamous epithelium using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000758.1 |
| Cell line/tissue: | esophagus squamous epithelium |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR003SZZ |
| Model: | BPNet |
| A [ | -9.54e-04 | -1.96e-03 | -2.43e-03 | -5.06e-04 | -2.83e-04 | 5.08e-03 | -2.90e-04 | -1.76e-04 | -1.46e-03 | 1.37e-02 | -1.24e-03 | -3.35e-03 | -2.88e-04 | -2.12e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.16e-02 | 4.16e-02 | -5.27e-04 | 7.95e-02 | 1.19e-01 | 3.46e-02 | 4.98e-02 | 1.27e-01 | 1.68e-04 | -1.41e-03 | 1.09e-02 | 4.96e-03 | -1.45e-04 | -1.25e-03 | ] |
| G [ | 2.25e-02 | -4.87e-04 | 7.15e-02 | -2.90e-05 | -2.99e-05 | 7.58e-05 | -9.20e-07 | -9.29e-06 | -9.47e-05 | 1.22e-02 | 4.87e-02 | -8.44e-04 | 1.31e-01 | 6.94e-02 | ] |
| T [ | -2.45e-03 | 7.81e-03 | -2.19e-03 | -8.03e-04 | -5.08e-04 | -2.17e-03 | 1.44e-02 | -2.40e-04 | 6.10e-02 | -3.92e-03 | -1.28e-03 | 2.16e-02 | -2.56e-04 | -1.03e-03 | ] |
| A [ | 2567 | 1311 | 2336 | 2167 | 180 | 10632 | 259 | 21 | 1351 | 10108 | 689 | 3587 | 1 | 1664 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9419 | 14562 | 753 | 25299 | 28480 | 15735 | 17098 | 28945 | 1820 | 2283 | 9965 | 3906 | 2 | 1671 | ] |
| G [ | 14238 | 1212 | 22157 | 892 | 65 | 1123 | 212 | 10 | 768 | 12284 | 17010 | 1081 | 29025 | 23111 | ] |
| T [ | 2807 | 11946 | 3785 | 673 | 306 | 1541 | 11462 | 55 | 25092 | 4356 | 1367 | 20457 | 3 | 2584 | ] |
