This page shows detailed deep learning-derived predictions and motifs for CTCF in H9 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000759.1 |
| Cell line/tissue: | H9 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR871MKQ |
| Model: | BPNet |
| A [ | -1.38e-03 | -1.14e-03 | 1.57e-02 | -6.87e-04 | -3.10e-03 | 5.14e-02 | -2.08e-04 | 5.38e-03 | -5.06e-03 | -1.10e-03 | -1.89e-03 | -1.97e-03 | 3.18e-03 | -2.05e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.19e-02 | 1.27e-01 | 1.63e-03 | 3.86e-02 | 1.19e-02 | -2.32e-04 | -4.26e-05 | -9.81e-05 | -7.35e-05 | -9.40e-05 | 2.48e-03 | 4.87e-02 | 1.63e-03 | 2.07e-02 | ] |
| G [ | -1.44e-03 | -5.19e-04 | 4.64e-03 | 1.07e-02 | -1.28e-03 | 1.59e-03 | 1.32e-01 | 6.98e-02 | 4.63e-02 | 1.15e-01 | 6.98e-02 | 7.70e-04 | 3.62e-02 | 6.34e-03 | ] |
| T [ | -1.90e-03 | -8.79e-04 | -4.44e-03 | -1.77e-03 | 1.53e-02 | -1.55e-03 | -3.40e-04 | -6.35e-04 | 1.18e-03 | -7.66e-04 | -6.19e-04 | -2.38e-03 | -2.43e-03 | -4.05e-04 | ] |
| A [ | 7329 | 1105 | 54299 | 6270 | 13824 | 69035 | 842 | 25944 | 8821 | 1560 | 5260 | 18006 | 29092 | 11614 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 69562 | 85758 | 5352 | 46744 | 34821 | 2273 | 129 | 714 | 3712 | 1755 | 8658 | 52299 | 10325 | 39091 | ] |
| G [ | 5450 | 236 | 10112 | 31013 | 7664 | 9291 | 85927 | 59318 | 49992 | 81936 | 65207 | 7466 | 39999 | 24210 | ] |
| T [ | 5095 | 338 | 17673 | 3410 | 31127 | 6836 | 538 | 1460 | 24911 | 2186 | 8311 | 9665 | 8020 | 12521 | ] |
