Detailed information of deep learning profile BP000764.1

This page shows detailed deep learning-derived predictions and motifs for CTCF in adrenal gland using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CTCF
Model ID: BP000764.1
Cell line/tissue: adrenal gland
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCSR408ZEE
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.25e-03 -4.49e-04 2.05e-02 -1.21e-03 -4.14e-03 6.08e-02 -2.49e-04 1.30e-02 -2.02e-03 -5.47e-04 -8.53e-04 -1.60e-03 6.43e-03 -2.03e-03 ]
C [ 7.35e-02 1.31e-01 -3.27e-04 5.00e-02 1.36e-02 -1.97e-04 -4.88e-05 -3.58e-05 -1.93e-04 -6.05e-05 3.48e-04 6.98e-02 -1.71e-04 2.27e-02 ]
G [ -1.37e-03 -1.75e-04 5.33e-03 8.75e-03 -1.95e-03 5.16e-04 1.33e-01 5.21e-02 3.95e-02 1.25e-01 8.19e-02 -2.11e-04 4.11e-02 9.54e-03 ]
T [ -2.04e-03 -3.62e-04 -3.49e-03 -1.27e-03 1.53e-02 -1.59e-03 -1.78e-04 -2.98e-04 3.46e-03 -3.19e-04 -5.72e-04 -2.38e-03 -2.16e-03 -1.11e-03 ]

Frequency matrix

A [ 2657 516 21224 1507 4540 25730 220 11942 1415 420 910 4370 12309 3133 ]
C [ 24177 29232 1220 18205 11964 826 51 240 966 139 1335 22017 1603 14820 ]
G [ 1527 144 4179 9558 2073 2055 29674 17556 16928 29192 25430 1113 14665 9249 ]
T [ 1703 171 3440 793 11486 1452 118 325 10754 312 2388 2563 1485 2861 ]

438 profiles found for the same TF (CTCF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000948.1 CTCF ENCSR265PFQ body of pancreas Homo sapiens
BP000949.1 CTCF ENCSR230RQK middle frontal area 46 Homo sapiens
BP000951.1 CTCF ENCSR237BTA middle frontal area 46 Homo sapiens
BP000952.1 CTCF ENCSR967QUQ middle frontal area 46 Homo sapiens
BP000953.1 CTCF ENCSR568IVD Peyer's patch Homo sapiens
BP000956.1 CTCF ENCSR774PGN pancreas Homo sapiens
BP000960.1 CTCF ENCSR724YTA middle frontal area 46 Homo sapiens
BP000964.1 CTCF ENCSR075NRV B cell Homo sapiens
BP000969.1 CTCF ENCSR493APD ovary Homo sapiens
BP000971.1 CTCF ENCSR806WWX activated CD4-positive and alpha-beta T cell Homo sapiens
Showing 10 profiles of page 32 from 44 pages