Detailed information of deep learning profile BP000764.1

This page shows detailed deep learning-derived predictions and motifs for CTCF in adrenal gland using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CTCF
Model ID: BP000764.1
Cell line/tissue: adrenal gland
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCSR408ZEE
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.25e-03 -4.49e-04 2.05e-02 -1.21e-03 -4.14e-03 6.08e-02 -2.49e-04 1.30e-02 -2.02e-03 -5.47e-04 -8.53e-04 -1.60e-03 6.43e-03 -2.03e-03 ]
C [ 7.35e-02 1.31e-01 -3.27e-04 5.00e-02 1.36e-02 -1.97e-04 -4.88e-05 -3.58e-05 -1.93e-04 -6.05e-05 3.48e-04 6.98e-02 -1.71e-04 2.27e-02 ]
G [ -1.37e-03 -1.75e-04 5.33e-03 8.75e-03 -1.95e-03 5.16e-04 1.33e-01 5.21e-02 3.95e-02 1.25e-01 8.19e-02 -2.11e-04 4.11e-02 9.54e-03 ]
T [ -2.04e-03 -3.62e-04 -3.49e-03 -1.27e-03 1.53e-02 -1.59e-03 -1.78e-04 -2.98e-04 3.46e-03 -3.19e-04 -5.72e-04 -2.38e-03 -2.16e-03 -1.11e-03 ]

Frequency matrix

A [ 2657 516 21224 1507 4540 25730 220 11942 1415 420 910 4370 12309 3133 ]
C [ 24177 29232 1220 18205 11964 826 51 240 966 139 1335 22017 1603 14820 ]
G [ 1527 144 4179 9558 2073 2055 29674 17556 16928 29192 25430 1113 14665 9249 ]
T [ 1703 171 3440 793 11486 1452 118 325 10754 312 2388 2563 1485 2861 ]

438 profiles found for the same TF (CTCF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001017.1 CTCF ENCSR930SOT brain Homo sapiens
BP001018.1 CTCF ENCSR000BHV A549 Homo sapiens
BP001020.1 CTCF ENCSR000DSU astrocyte of the spinal cord Homo sapiens
BP001021.1 CTCF ENCSR614HHL vagina Homo sapiens
BP001022.1 CTCF ENCSR705DNM middle frontal area 46 Homo sapiens
BP001025.1 CTCF ENCSR587KPW heart right ventricle Homo sapiens
BP001026.1 CTCF ENCSR984IUE psoas muscle Homo sapiens
BP001027.1 CTCF ENCSR676LDQ middle frontal area 46 Homo sapiens
BP001036.1 CTCF ENCSR000DWQ foreskin fibroblast Homo sapiens
BP001038.1 CTCF ENCSR000AKO K562 Homo sapiens
Showing 10 profiles of page 35 from 44 pages