Detailed information of deep learning profile BP000764.1

This page shows detailed deep learning-derived predictions and motifs for CTCF in adrenal gland using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CTCF
Model ID: BP000764.1
Cell line/tissue: adrenal gland
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCSR408ZEE
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.25e-03 -4.49e-04 2.05e-02 -1.21e-03 -4.14e-03 6.08e-02 -2.49e-04 1.30e-02 -2.02e-03 -5.47e-04 -8.53e-04 -1.60e-03 6.43e-03 -2.03e-03 ]
C [ 7.35e-02 1.31e-01 -3.27e-04 5.00e-02 1.36e-02 -1.97e-04 -4.88e-05 -3.58e-05 -1.93e-04 -6.05e-05 3.48e-04 6.98e-02 -1.71e-04 2.27e-02 ]
G [ -1.37e-03 -1.75e-04 5.33e-03 8.75e-03 -1.95e-03 5.16e-04 1.33e-01 5.21e-02 3.95e-02 1.25e-01 8.19e-02 -2.11e-04 4.11e-02 9.54e-03 ]
T [ -2.04e-03 -3.62e-04 -3.49e-03 -1.27e-03 1.53e-02 -1.59e-03 -1.78e-04 -2.98e-04 3.46e-03 -3.19e-04 -5.72e-04 -2.38e-03 -2.16e-03 -1.11e-03 ]

Frequency matrix

A [ 2657 516 21224 1507 4540 25730 220 11942 1415 420 910 4370 12309 3133 ]
C [ 24177 29232 1220 18205 11964 826 51 240 966 139 1335 22017 1603 14820 ]
G [ 1527 144 4179 9558 2073 2055 29674 17556 16928 29192 25430 1113 14665 9249 ]
T [ 1703 171 3440 793 11486 1452 118 325 10754 312 2388 2563 1485 2861 ]

438 profiles found for the same TF (CTCF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001084.1 CTCF ENCSR206ETG gastroesophageal sphincter Homo sapiens
BP001086.1 CTCF ENCSR351SWL middle frontal area 46 Homo sapiens
BP001087.1 CTCF ENCSR832TWW middle frontal area 46 Homo sapiens
BP001088.1 CTCF ENCSR839NFL right lobe of liver Homo sapiens
BP001089.1 CTCF ENCSR000DLW endothelial cell of umbilical vein Homo sapiens
BP001092.1 CTCF ENCSR000DRU GM12875 Homo sapiens
BP001095.1 CTCF ENCSR470KCE CD4-positive and alpha-beta T cell Homo sapiens
BP001099.1 CTCF ENCSR000DWY fibroblast of lung Homo sapiens
BP001103.1 CTCF ENCSR000DXI bronchial epithelial cell Homo sapiens
BP001106.1 CTCF ENCSR000DUU fibroblast of mammary gland Homo sapiens
Showing 10 profiles of page 38 from 44 pages