This page shows detailed deep learning-derived predictions and motifs for CTCF in heart right ventricle using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000766.1 |
| Cell line/tissue: | heart right ventricle |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR089NBS |
| Model: | BPNet |
| A [ | -1.52e-03 | -3.92e-03 | -2.87e-03 | 1.99e-04 | -5.44e-04 | 9.77e-03 | -5.48e-04 | -2.69e-04 | -2.18e-03 | 1.65e-02 | -1.88e-03 | -5.34e-03 | -7.20e-04 | -3.02e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.23e-02 | 5.60e-02 | -1.35e-03 | 1.11e-01 | 1.71e-01 | 5.18e-02 | 7.06e-02 | 1.73e-01 | 3.45e-04 | -2.46e-03 | 1.08e-02 | 6.64e-03 | -3.68e-04 | -2.00e-03 | ] |
| G [ | 3.24e-02 | -9.81e-04 | 9.08e-02 | -7.44e-04 | -7.61e-05 | -1.32e-04 | -1.25e-04 | -3.27e-05 | -1.63e-04 | 1.77e-02 | 5.69e-02 | -5.87e-04 | 1.73e-01 | 8.28e-02 | ] |
| T [ | -2.67e-03 | 1.36e-02 | -2.72e-03 | -1.36e-03 | -7.78e-04 | -4.13e-03 | 2.18e-02 | -3.11e-04 | 7.43e-02 | -4.36e-03 | -2.04e-03 | 2.89e-02 | -1.08e-03 | -1.32e-03 | ] |
| A [ | 2196 | 1196 | 1511 | 648 | 67 | 10673 | 153 | 0 | 1261 | 9439 | 687 | 2984 | 1 | 2080 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8882 | 10272 | 235 | 24010 | 24667 | 12477 | 13173 | 24879 | 1481 | 1924 | 7968 | 2320 | 1 | 1808 | ] |
| G [ | 11258 | 791 | 21232 | 118 | 7 | 562 | 107 | 0 | 564 | 9257 | 15073 | 701 | 24873 | 17965 | ] |
| T [ | 2544 | 12622 | 1902 | 105 | 140 | 1169 | 11448 | 2 | 21575 | 4261 | 1154 | 18877 | 6 | 3028 | ] |
