This page shows detailed deep learning-derived predictions and motifs for CTCF in esophagus squamous epithelium using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000767.1 |
| Cell line/tissue: | esophagus squamous epithelium |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR838RUX |
| Model: | BPNet |
| A [ | -8.72e-04 | -2.26e-03 | -2.48e-03 | -4.03e-04 | -5.62e-04 | 4.35e-03 | -4.26e-04 | -2.25e-04 | -1.87e-03 | 1.96e-02 | -1.76e-03 | -4.63e-03 | -3.99e-04 | -2.44e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.73e-03 | 4.35e-02 | -2.73e-04 | 8.92e-02 | 1.41e-01 | 4.49e-02 | 6.62e-02 | 1.65e-01 | 4.11e-04 | -2.08e-03 | 1.18e-02 | 6.33e-03 | -1.64e-04 | -1.81e-03 | ] |
| G [ | 2.27e-02 | -2.69e-04 | 6.98e-02 | 2.92e-04 | -3.85e-05 | 2.34e-05 | -3.52e-05 | -3.20e-05 | -2.41e-04 | 1.46e-02 | 5.97e-02 | -7.28e-04 | 1.63e-01 | 8.73e-02 | ] |
| T [ | -2.10e-03 | 9.03e-03 | -2.02e-03 | -1.21e-03 | -8.50e-04 | -3.14e-03 | 1.42e-02 | -3.39e-04 | 7.59e-02 | -4.78e-03 | -1.33e-03 | 2.61e-02 | -2.91e-04 | -1.11e-03 | ] |
| A [ | 3435 | 1940 | 3028 | 2648 | 408 | 11637 | 278 | 35 | 1490 | 11572 | 836 | 4220 | 0 | 1850 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10692 | 16111 | 1388 | 28161 | 32345 | 17974 | 20661 | 33275 | 2131 | 2520 | 11563 | 4779 | 0 | 1833 | ] |
| G [ | 15511 | 2075 | 24025 | 1442 | 252 | 1571 | 256 | 12 | 922 | 14247 | 19326 | 1193 | 33399 | 26858 | ] |
| T [ | 3762 | 13274 | 4958 | 1150 | 395 | 2218 | 12206 | 78 | 28857 | 5060 | 1675 | 23209 | 1 | 2860 | ] |
