This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000768.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000BHW |
| Model: | BPNet |
| A [ | -1.74e-03 | -1.17e-03 | 2.63e-02 | -1.77e-03 | -4.44e-03 | 7.35e-02 | -3.66e-04 | 1.66e-02 | -4.00e-03 | -8.19e-04 | -1.48e-03 | -3.91e-03 | 8.86e-03 | -3.09e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.07e-02 | 1.64e-01 | -4.56e-04 | 5.19e-02 | 1.49e-02 | -4.75e-04 | -1.10e-04 | -1.80e-04 | -3.97e-04 | -5.41e-05 | -3.69e-05 | 9.56e-02 | -6.27e-04 | 3.55e-02 | ] |
| G [ | -2.14e-03 | -4.12e-04 | 5.79e-03 | 1.20e-02 | -2.38e-03 | 5.09e-04 | 1.72e-01 | 6.88e-02 | 5.15e-02 | 1.61e-01 | 1.10e-01 | -1.09e-03 | 5.50e-02 | 8.34e-03 | ] |
| T [ | -2.80e-03 | -7.87e-04 | -5.71e-03 | -2.06e-03 | 1.68e-02 | -2.18e-03 | -2.94e-04 | -5.52e-04 | 6.86e-03 | -6.02e-04 | -2.54e-04 | -3.13e-03 | -3.72e-03 | -1.31e-03 | ] |
| A [ | 4536 | 469 | 31211 | 2804 | 7414 | 37890 | 165 | 18063 | 2971 | 741 | 1350 | 6895 | 18792 | 4774 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 35298 | 45275 | 2125 | 25239 | 18384 | 1165 | 18 | 363 | 1528 | 178 | 1996 | 33349 | 2925 | 22485 | ] |
| G [ | 2973 | 82 | 5823 | 16377 | 3844 | 3847 | 45687 | 26994 | 25338 | 44513 | 38602 | 1741 | 21619 | 13677 | ] |
| T [ | 3144 | 125 | 6793 | 1531 | 16309 | 3048 | 81 | 531 | 16114 | 519 | 4003 | 3967 | 2614 | 5015 | ] |