This page shows detailed deep learning-derived predictions and motifs for CTCF in GM23338 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000769.1 |
| Cell line/tissue: | GM23338 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR987GXT |
| Model: | BPNet |
| A [ | -9.12e-04 | -2.40e-03 | -2.35e-03 | -1.99e-04 | -3.67e-04 | 2.77e-03 | -7.19e-04 | -3.12e-04 | -2.02e-03 | 1.35e-02 | -2.21e-03 | -3.76e-03 | -1.18e-03 | -2.32e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.30e-03 | 5.59e-02 | -1.06e-03 | 1.01e-01 | 1.39e-01 | 4.26e-02 | 7.18e-02 | 1.46e-01 | 1.36e-03 | -2.02e-03 | 9.87e-03 | 6.32e-03 | -1.14e-03 | -2.16e-03 | ] |
| G [ | 2.93e-02 | -7.41e-04 | 7.57e-02 | -4.27e-04 | 2.02e-05 | -3.83e-04 | -1.87e-04 | -6.38e-05 | -3.50e-04 | 1.20e-02 | 3.16e-02 | 1.49e-03 | 1.20e-01 | 6.17e-02 | ] |
| T [ | -2.26e-03 | 7.21e-03 | -3.38e-03 | -7.12e-04 | -4.39e-04 | -5.39e-03 | 8.91e-03 | -2.11e-04 | 5.82e-02 | -2.94e-03 | -9.05e-04 | 1.48e-02 | -1.53e-03 | -1.54e-03 | ] |
| A [ | 6172 | 3028 | 4996 | 2533 | 265 | 19627 | 559 | 22 | 4604 | 20401 | 2835 | 11432 | 1312 | 5065 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 17295 | 33006 | 1859 | 57731 | 60534 | 34497 | 39396 | 61175 | 5138 | 6301 | 23162 | 9606 | 1784 | 5630 | ] |
| G [ | 31449 | 2858 | 44965 | 514 | 79 | 1753 | 230 | 9 | 1330 | 24424 | 28847 | 5072 | 54521 | 43004 | ] |
| T [ | 6359 | 22383 | 9454 | 496 | 396 | 5397 | 21089 | 68 | 50202 | 10148 | 6430 | 35163 | 3656 | 7575 | ] |
