Detailed information of deep learning profile BP000770.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP000770.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5 MA0162.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR000BNE
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.90e-03 -4.69e-04 2.42e-03 -7.10e-07 4.88e-06 -6.58e-05 2.47e-02 -8.88e-06 -1.02e-03 -5.83e-04 ]
C [ 2.15e-02 6.36e-02 7.36e-05 1.06e-01 8.66e-02 7.43e-02 1.50e-02 1.04e-01 3.15e-04 3.75e-02 ]
G [ -4.35e-04 -1.78e-04 2.47e-02 3.94e-06 1.78e-05 9.70e-06 -2.64e-05 -2.64e-07 2.41e-02 -5.88e-04 ]
T [ -1.08e-03 -5.84e-04 -2.53e-03 -1.74e-06 3.25e-05 2.35e-04 -1.60e-04 -3.13e-05 -2.68e-03 -7.10e-04 ]

Frequency matrix

A [ 21423 4836 30973 234 817 886 57963 235 27310 7682 ]
C [ 82284 109868 9663 123979 122662 111930 51607 123121 21623 81552 ]
G [ 11456 3608 57049 243 774 786 10112 396 49997 16724 ]
T [ 9404 6255 26882 111 314 10965 4885 815 25637 18609 ]

Alternative motif patterns (AMPs)

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
Showing 10 profiles of page 1 from 1 pages
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