This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000775.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DPF |
| Model: | BPNet |
| A [ | -2.73e-03 | -1.68e-03 | 2.63e-02 | -1.79e-03 | -5.93e-03 | 8.95e-02 | -5.28e-04 | 1.29e-02 | -6.42e-03 | -1.31e-03 | -2.44e-03 | -3.80e-03 | 7.11e-03 | -3.72e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.13e-01 | 1.99e-01 | 1.59e-04 | 6.52e-02 | 1.82e-02 | -4.72e-04 | -1.04e-04 | -2.01e-04 | -5.38e-04 | -4.87e-05 | 2.75e-03 | 9.24e-02 | 1.38e-03 | 3.63e-02 | ] |
| G [ | -2.33e-03 | -7.68e-04 | 7.11e-03 | 1.49e-02 | -2.72e-03 | 1.24e-03 | 2.13e-01 | 9.38e-02 | 6.90e-02 | 1.87e-01 | 1.14e-01 | 3.82e-04 | 5.80e-02 | 1.05e-02 | ] |
| T [ | -3.23e-03 | -1.19e-03 | -6.03e-03 | -2.49e-03 | 2.33e-02 | -2.81e-03 | -4.39e-04 | -9.11e-04 | 3.45e-03 | -1.04e-03 | -1.27e-03 | -3.72e-03 | -4.16e-03 | -8.84e-04 | ] |
| A [ | 5495 | 1786 | 38215 | 4082 | 9035 | 49938 | 376 | 20521 | 4874 | 1203 | 2675 | 10417 | 21684 | 6907 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 47432 | 57427 | 3216 | 32925 | 24838 | 1442 | 86 | 515 | 2323 | 699 | 4115 | 40522 | 5325 | 28938 | ] |
| G [ | 3689 | 524 | 8679 | 21450 | 4962 | 5069 | 59573 | 38394 | 34433 | 57186 | 48332 | 3463 | 28951 | 16948 | ] |
| T [ | 3643 | 522 | 10150 | 1802 | 21424 | 3811 | 224 | 829 | 18629 | 1171 | 5137 | 5856 | 4299 | 7466 | ] |