This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000776.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR979ZEO |
| Model: | BPNet |
| A [ | -4.33e-04 | 2.06e-03 | -2.33e-03 | -2.14e-03 | -1.14e-04 | 9.34e-04 | 7.92e-04 | 8.54e-04 | -1.19e-03 | -4.24e-03 | -4.79e-03 | 7.09e-03 | -1.23e-03 | -6.05e-04 | 3.09e-02 | -1.18e-03 | -3.82e-03 | 7.85e-02 | -2.83e-04 | 6.43e-03 | -3.88e-03 | -1.44e-03 | -1.56e-03 | -8.73e-04 | 3.58e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | -2.88e-03 | 1.09e-03 | 2.78e-02 | 1.24e-02 | 6.14e-03 | 2.81e-03 | 1.32e-04 | -1.48e-03 | 2.62e-03 | 1.36e-02 | 6.42e-03 | -1.96e-03 | 1.10e-01 | 1.71e-01 | -1.13e-04 | 6.20e-02 | 1.47e-02 | -3.40e-04 | -2.11e-05 | -5.65e-05 | -4.31e-04 | -3.22e-04 | 1.63e-03 | 5.00e-02 | 1.51e-03 | ] |
| G [ | -8.85e-04 | -1.68e-03 | -2.99e-03 | -1.38e-03 | -9.25e-04 | -1.13e-03 | -2.12e-04 | -2.39e-04 | 7.21e-04 | -1.79e-03 | 1.02e-02 | 1.41e-02 | -1.51e-03 | -2.11e-04 | 3.20e-03 | 1.17e-02 | -1.80e-03 | 1.33e-03 | 1.68e-01 | 8.25e-02 | 5.17e-02 | 1.24e-01 | 6.84e-02 | 3.06e-04 | 2.98e-02 | ] |
| T [ | 2.66e-02 | 3.52e-03 | 5.33e-04 | -3.17e-05 | -1.35e-03 | -5.79e-04 | 1.12e-03 | 3.83e-03 | 1.07e-03 | 8.81e-03 | -2.28e-03 | -4.47e-03 | -1.87e-03 | -4.71e-04 | -5.03e-03 | -1.84e-03 | 2.36e-02 | -1.82e-03 | -2.26e-04 | -6.41e-04 | 1.19e-03 | -1.11e-03 | -1.03e-03 | -2.54e-03 | -2.60e-03 | ] |
| A [ | 6728 | 9336 | 6556 | 8387 | 9890 | 10502 | 10284 | 10430 | 8730 | 4806 | 7795 | 11985 | 2391 | 4 | 28747 | 1819 | 5206 | 34330 | 36 | 11736 | 3080 | 1070 | 3104 | 7627 | 14711 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 5191 | 8838 | 17274 | 13794 | 12032 | 10437 | 9520 | 7953 | 9777 | 12639 | 8274 | 3741 | 33714 | 38141 | 1058 | 23750 | 15570 | 403 | 7 | 124 | 1254 | 972 | 2983 | 22629 | 4546 | ] |
| G [ | 7361 | 7688 | 4752 | 5598 | 7618 | 8179 | 7499 | 6919 | 8865 | 4252 | 13168 | 15207 | 852 | 0 | 2937 | 11726 | 1679 | 1965 | 38079 | 25707 | 21790 | 34310 | 27903 | 3057 | 15009 | ] |
| T [ | 18865 | 12284 | 9564 | 10366 | 8605 | 9027 | 10843 | 12842 | 10774 | 16448 | 8908 | 7212 | 1188 | 0 | 5403 | 850 | 15691 | 1447 | 23 | 578 | 12022 | 1793 | 4156 | 4833 | 3878 | ] |
