This page shows detailed deep learning-derived predictions and motifs for CTCF in GM10266 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000777.1 |
| Cell line/tissue: | GM10266 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DKR |
| Model: | BPNet |
| A [ | -9.08e-04 | -3.55e-03 | -3.81e-03 | -2.84e-04 | -5.73e-04 | 7.18e-03 | -5.66e-04 | -4.31e-04 | -2.63e-03 | 2.01e-02 | -2.55e-03 | -6.02e-03 | -9.22e-04 | -3.18e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.63e-03 | 6.15e-02 | -5.22e-04 | 1.12e-01 | 1.71e-01 | 5.81e-02 | 7.84e-02 | 1.85e-01 | 3.53e-04 | -2.23e-03 | 1.21e-02 | 7.05e-03 | -6.23e-04 | -2.04e-03 | ] |
| G [ | 3.92e-02 | -3.90e-04 | 9.87e-02 | 4.06e-04 | -1.24e-04 | -4.69e-04 | -1.94e-04 | -1.30e-04 | -3.98e-04 | 1.12e-02 | 5.44e-02 | -3.97e-04 | 1.76e-01 | 8.48e-02 | ] |
| T [ | -3.40e-03 | 9.76e-03 | -4.04e-03 | -1.78e-03 | -8.13e-04 | -4.97e-03 | 1.82e-02 | -5.01e-04 | 7.39e-02 | -4.65e-03 | -1.48e-03 | 2.44e-02 | -1.23e-03 | -2.18e-03 | ] |
| A [ | 4102 | 1739 | 3758 | 3148 | 440 | 15986 | 343 | 287 | 3210 | 15052 | 1642 | 6992 | 51 | 3232 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 13172 | 23504 | 1288 | 38865 | 43025 | 23099 | 28273 | 43279 | 4281 | 4513 | 16568 | 6334 | 41 | 3489 | ] |
| G [ | 22828 | 1809 | 33217 | 1252 | 162 | 2059 | 346 | 148 | 1664 | 17523 | 23012 | 2364 | 43923 | 33026 | ] |
| T [ | 4097 | 17148 | 5935 | 935 | 572 | 3055 | 15237 | 485 | 35044 | 7111 | 2976 | 28508 | 184 | 4452 | ] |
