This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000778.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR173IEA |
| Model: | BPNet |
| A [ | -1.33e-03 | -3.16e-03 | -2.78e-03 | 4.33e-05 | -3.91e-04 | 7.98e-03 | -5.02e-04 | -1.97e-04 | -1.98e-03 | 1.71e-02 | -1.93e-03 | -3.99e-03 | -6.31e-04 | -2.44e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.01e-02 | 5.04e-02 | -1.01e-03 | 9.42e-02 | 1.41e-01 | 4.55e-02 | 5.55e-02 | 1.51e-01 | 3.93e-04 | -1.86e-03 | 1.06e-02 | 4.30e-03 | -4.05e-04 | -1.72e-03 | ] |
| G [ | 3.12e-02 | -7.20e-04 | 8.53e-02 | -2.54e-04 | -3.97e-05 | -2.81e-04 | -1.79e-04 | -5.98e-05 | -3.13e-04 | 1.12e-02 | 4.86e-02 | -4.01e-04 | 1.42e-01 | 7.17e-02 | ] |
| T [ | -2.60e-03 | 8.45e-03 | -2.89e-03 | -1.01e-03 | -5.84e-04 | -3.74e-03 | 1.81e-02 | -4.25e-04 | 6.75e-02 | -4.04e-03 | -1.85e-03 | 2.16e-02 | -7.50e-04 | -1.69e-03 | ] |
| A [ | 3771 | 1888 | 3070 | 2972 | 248 | 15583 | 337 | 174 | 2648 | 14231 | 1475 | 5829 | 191 | 2975 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12191 | 20474 | 862 | 36649 | 40238 | 21439 | 24194 | 40362 | 3318 | 3763 | 14880 | 5469 | 287 | 2972 | ] |
| G [ | 21160 | 1570 | 31646 | 759 | 78 | 1476 | 303 | 85 | 1255 | 16363 | 21814 | 2098 | 40049 | 30885 | ] |
| T [ | 3871 | 17062 | 5415 | 613 | 429 | 2495 | 16159 | 372 | 33772 | 6635 | 2824 | 27598 | 466 | 4161 | ] |
