This page shows detailed deep learning-derived predictions and motifs for CTCF in kidney epithelial cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000780.1 |
| Cell line/tissue: | kidney epithelial cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DVH |
| Model: | BPNet |
| A [ | -1.60e-03 | -4.95e-03 | -4.92e-03 | -1.24e-03 | -1.02e-03 | 5.05e-03 | -1.15e-03 | -4.79e-04 | -3.58e-03 | 2.52e-02 | -3.04e-03 | -8.46e-03 | -1.18e-03 | -4.53e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.41e-02 | 7.01e-02 | 2.33e-04 | 1.46e-01 | 2.33e-01 | 8.02e-02 | 1.08e-01 | 2.49e-01 | 1.70e-03 | -3.59e-03 | 1.79e-02 | 7.86e-03 | -6.82e-04 | -2.78e-03 | ] |
| G [ | 4.04e-02 | 8.17e-04 | 1.08e-01 | 1.73e-03 | -1.15e-04 | -6.43e-04 | -3.15e-04 | -1.13e-04 | -5.00e-04 | 2.55e-02 | 7.98e-02 | 9.30e-04 | 2.36e-01 | 1.29e-01 | ] |
| T [ | -3.92e-03 | 9.73e-03 | -4.14e-03 | -2.97e-03 | -1.47e-03 | -7.37e-03 | 1.56e-02 | -5.75e-04 | 1.01e-01 | -7.83e-03 | -2.73e-03 | 3.02e-02 | -1.72e-03 | -2.61e-03 | ] |
| A [ | 5909 | 3318 | 4897 | 4126 | 372 | 17135 | 637 | 258 | 3447 | 18149 | 1770 | 8410 | 58 | 3477 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15416 | 25562 | 2484 | 43521 | 51242 | 28885 | 32662 | 51452 | 4653 | 4761 | 19472 | 6847 | 55 | 3643 | ] |
| G [ | 25345 | 3790 | 36087 | 2884 | 140 | 2067 | 486 | 115 | 1564 | 21238 | 27587 | 2737 | 51800 | 40171 | ] |
| T [ | 5602 | 19602 | 8805 | 1741 | 518 | 4185 | 18487 | 447 | 42609 | 8124 | 3442 | 34278 | 359 | 4980 | ] |
