This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000781.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR160GVO |
| Model: | BPNet |
| A [ | -4.20e-04 | -1.33e-03 | -2.02e-03 | -1.29e-03 | -2.89e-04 | 4.03e-03 | -1.85e-04 | -1.52e-04 | -1.24e-03 | 1.92e-02 | -9.53e-04 | -3.88e-03 | -1.81e-04 | -1.39e-03 | -3.33e-03 | -2.42e-03 | 1.11e-02 | -7.03e-04 | 4.51e-03 | 1.17e-03 | -1.00e-03 | -1.61e-03 | -6.20e-04 | -5.17e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.56e-03 | 6.39e-02 | -9.69e-05 | 1.00e-01 | 1.48e-01 | 4.90e-02 | 7.91e-02 | 1.61e-01 | -3.56e-05 | -2.42e-03 | 6.11e-03 | 8.88e-03 | -9.74e-05 | -1.26e-03 | 2.17e-02 | 1.32e-02 | -2.80e-03 | 1.29e-03 | -1.25e-03 | -1.05e-03 | -6.37e-04 | -2.92e-04 | -9.05e-04 | -2.21e-03 | ] |
| G [ | 2.60e-02 | -2.75e-04 | 9.20e-02 | -5.91e-05 | -6.18e-05 | -3.51e-04 | -3.58e-05 | -3.38e-05 | -2.44e-04 | 1.71e-02 | 7.05e-02 | -5.22e-04 | 1.69e-01 | 1.10e-01 | -2.13e-03 | 4.66e-03 | 1.75e-02 | 2.64e-03 | 1.31e-04 | 1.98e-03 | 5.85e-03 | 6.51e-03 | 1.51e-02 | 3.44e-02 | ] |
| T [ | -2.04e-03 | 6.11e-03 | -1.04e-03 | -8.31e-04 | -6.56e-04 | -2.18e-03 | 1.30e-02 | -1.52e-04 | 9.23e-02 | -3.43e-03 | -8.20e-04 | 3.53e-02 | -2.37e-04 | -1.43e-03 | 5.48e-03 | -4.77e-03 | -3.28e-03 | -1.09e-03 | -6.33e-04 | -5.19e-04 | -7.41e-04 | -6.28e-04 | -1.89e-03 | -2.21e-03 | ] |
| A [ | 1272 | 628 | 1052 | 946 | 257 | 4561 | 122 | 42 | 472 | 5047 | 253 | 1474 | 40 | 526 | 2250 | 3003 | 6076 | 3643 | 4452 | 3495 | 2792 | 2756 | 3564 | 3129 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 4196 | 7616 | 571 | 11906 | 13514 | 8318 | 9310 | 13967 | 772 | 837 | 4104 | 2121 | 42 | 510 | 6711 | 5673 | 1606 | 3866 | 2843 | 3132 | 3277 | 3020 | 2173 | 1768 | ] |
| G [ | 7113 | 804 | 10676 | 685 | 118 | 487 | 83 | 19 | 336 | 6375 | 9157 | 491 | 13906 | 12111 | 1185 | 2981 | 4975 | 3411 | 3160 | 3873 | 4438 | 4889 | 5866 | 7273 | ] |
| T [ | 1510 | 5043 | 1792 | 554 | 202 | 725 | 4576 | 63 | 12511 | 1832 | 578 | 10005 | 103 | 944 | 3945 | 2434 | 1433 | 3171 | 3636 | 3591 | 3585 | 3426 | 2488 | 1920 | ] |