Detailed information of deep learning profile BP000782.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000782.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR857QEA
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.32e-03 -6.38e-04 3.04e-03 3.45e-02 -2.13e-05 1.57e-02 -8.81e-04 2.74e-03 5.88e-03 -8.92e-04 8.79e-05 -5.26e-05 1.75e-03 2.03e-05 -1.13e-03 ]
C [ -9.65e-06 -1.06e-04 -1.14e-03 -3.61e-04 6.00e-02 -7.42e-04 1.52e-03 -5.46e-04 6.39e-04 2.13e-03 -5.42e-06 -2.09e-05 6.19e-05 4.87e-02 4.46e-03 ]
G [ 5.07e-03 3.03e-02 6.59e-05 -3.40e-04 -1.27e-04 2.17e-03 4.28e-03 -3.45e-04 1.65e-03 -4.05e-04 6.84e-02 -1.08e-05 -1.23e-03 4.01e-06 -1.07e-04 ]
T [ -1.59e-03 -9.93e-05 7.84e-04 -4.15e-04 6.72e-05 -1.08e-03 1.53e-03 1.96e-03 -4.71e-04 2.12e-02 0.00e+00 4.51e-02 4.91e-03 4.64e-05 7.69e-03 ]

Frequency matrix

A [ 15773 8888 14010 27100 684 23477 7341 12319 12658 6127 35 1650 9553 947 7105 ]
C [ 3848 1923 7707 3333 36347 3495 10306 7784 10864 2227 6 479 8257 38485 12746 ]
G [ 13102 22380 9969 4289 2015 3841 13136 7939 9962 902 40775 149 5377 78 908 ]
T [ 8096 7628 9132 6097 1773 10005 10037 12777 7336 31563 3 38541 17631 1309 20060 ]

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages