This page shows detailed deep learning-derived predictions and motifs for CTCF in spleen using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000783.1 |
| Cell line/tissue: | spleen |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR692ILH |
| Model: | BPNet |
| A [ | -1.13e-03 | -2.08e-04 | 1.99e-02 | -9.50e-04 | -3.56e-03 | 5.70e-02 | -1.75e-04 | 1.19e-02 | -1.61e-03 | -4.28e-04 | -7.37e-04 | -1.64e-03 | 7.51e-03 | -1.56e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.53e-02 | 1.16e-01 | -3.99e-04 | 4.39e-02 | 1.18e-02 | -1.65e-04 | -1.52e-05 | -1.04e-05 | -2.00e-04 | -3.63e-05 | -5.46e-05 | 5.68e-02 | -3.25e-04 | 1.61e-02 | ] |
| G [ | -9.83e-04 | -5.75e-05 | 4.42e-03 | 7.03e-03 | -1.42e-03 | 4.19e-04 | 1.13e-01 | 4.72e-02 | 3.33e-02 | 1.04e-01 | 6.92e-02 | -2.92e-04 | 3.34e-02 | 7.39e-03 | ] |
| T [ | -1.50e-03 | -1.80e-04 | -2.28e-03 | -8.22e-04 | 1.16e-02 | -1.18e-03 | -1.45e-04 | -1.79e-04 | 4.00e-03 | -2.43e-04 | -2.64e-04 | -1.43e-03 | -1.40e-03 | -5.13e-04 | ] |
| A [ | 1811 | 68 | 15864 | 939 | 3331 | 19383 | 149 | 8380 | 1097 | 319 | 744 | 3072 | 8956 | 2377 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 18529 | 22459 | 766 | 13828 | 9730 | 676 | 28 | 156 | 866 | 225 | 1087 | 16430 | 1277 | 10791 | ] |
| G [ | 1125 | 10 | 3333 | 7217 | 1633 | 1523 | 22305 | 13832 | 12760 | 21695 | 18854 | 1035 | 11174 | 7223 | ] |
| T [ | 1086 | 14 | 2588 | 568 | 7857 | 969 | 69 | 183 | 7828 | 312 | 1867 | 2014 | 1144 | 2160 | ] |
