This page shows detailed deep learning-derived predictions and motifs for CTCF in glutamatergic neuron using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000784.1 |
| Cell line/tissue: | glutamatergic neuron |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR489QDF |
| Model: | BPNet |
| A [ | -1.19e-03 | -5.45e-04 | 2.30e-02 | -1.03e-03 | -3.36e-03 | 6.74e-02 | -2.52e-04 | 8.82e-03 | -3.11e-03 | -9.80e-04 | -1.21e-03 | -1.04e-03 | 3.56e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.38e-02 | 1.39e-01 | -2.80e-04 | 5.04e-02 | 1.29e-02 | -2.53e-04 | -6.39e-05 | -1.24e-04 | -2.32e-04 | -1.31e-04 | 1.15e-03 | 4.91e-02 | 1.21e-03 | ] |
| G [ | -1.35e-03 | -2.11e-04 | 4.24e-03 | 8.71e-03 | -1.50e-03 | 7.90e-04 | 1.34e-01 | 6.59e-02 | 4.56e-02 | 1.07e-01 | 6.46e-02 | 1.30e-04 | 3.11e-02 | ] |
| T [ | -1.86e-03 | -4.18e-04 | -4.31e-03 | -1.31e-03 | 1.72e-02 | -1.62e-03 | -2.29e-04 | -4.53e-04 | 1.02e-03 | -7.44e-04 | -6.83e-04 | -2.01e-03 | -2.15e-03 | ] |
| A [ | 3281 | 98 | 29439 | 2341 | 6197 | 36384 | 241 | 13495 | 3021 | 932 | 2421 | 7386 | 15298 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 35529 | 42757 | 1888 | 25379 | 17780 | 1105 | 73 | 292 | 1885 | 835 | 3337 | 27932 | 4576 | ] |
| G [ | 1989 | 20 | 5511 | 14052 | 2918 | 3283 | 42464 | 28584 | 25444 | 39784 | 33189 | 3091 | 19531 | ] |
| T [ | 2116 | 40 | 6076 | 1143 | 16020 | 2143 | 137 | 544 | 12565 | 1364 | 3968 | 4505 | 3510 | ] |
