Detailed information of deep learning profile BP000789.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000789.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR000BHE
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.88e-05 3.58e-04 1.31e-02 2.45e-06 6.03e-03 -4.97e-04 1.23e-03 4.05e-04 -2.76e-04 -1.54e-05 -6.08e-05 -5.77e-05 -3.67e-05 -3.67e-04 ]
C [ 1.93e-06 9.37e-05 0.00e+00 1.87e-02 -3.00e-05 9.07e-04 -4.44e-04 1.60e-03 4.27e-04 2.41e-05 1.15e-05 2.10e-04 1.01e-02 2.11e-03 ]
G [ 1.24e-02 -2.16e-04 2.95e-05 0.00e+00 9.02e-04 1.16e-04 -2.27e-04 7.86e-04 -4.81e-05 1.46e-02 -1.09e-05 -1.71e-05 -3.82e-05 -1.95e-05 ]
T [ 1.01e-04 4.18e-04 -7.72e-06 0.00e+00 -4.53e-04 8.67e-04 6.51e-04 -3.72e-04 6.27e-03 -1.29e-05 1.26e-02 6.36e-04 -2.01e-04 9.07e-04 ]

Frequency matrix

A [ 64 591 1449 0 1150 207 513 372 221 58 74 270 153 244 ]
C [ 11 267 11 1545 39 400 250 558 157 44 70 364 1188 605 ]
G [ 1392 337 41 0 149 437 302 422 85 1411 66 314 48 75 ]
T [ 78 350 44 0 207 501 480 193 1082 32 1335 597 156 621 ]

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages