Detailed information of deep learning profile BP000789.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000789.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR000BHE
Model: BPNet

Contribution weight matrix (CWM)

A [ 9.07e-04 -2.01e-04 6.36e-04 1.26e-02 -1.29e-05 6.27e-03 -3.72e-04 6.51e-04 8.67e-04 -4.53e-04 0.00e+00 -7.72e-06 4.18e-04 1.01e-04 ]
C [ -1.95e-05 -3.82e-05 -1.71e-05 -1.09e-05 1.46e-02 -4.81e-05 7.86e-04 -2.27e-04 1.16e-04 9.02e-04 0.00e+00 2.95e-05 -2.16e-04 1.24e-02 ]
G [ 2.11e-03 1.01e-02 2.10e-04 1.15e-05 2.41e-05 4.27e-04 1.60e-03 -4.44e-04 9.07e-04 -3.00e-05 1.87e-02 0.00e+00 9.37e-05 1.93e-06 ]
T [ -3.67e-04 -3.67e-05 -5.77e-05 -6.08e-05 -1.54e-05 -2.76e-04 4.05e-04 1.23e-03 -4.97e-04 6.03e-03 2.45e-06 1.31e-02 3.58e-04 -7.88e-05 ]

Frequency matrix

A [ 621 156 597 1335 32 1082 193 480 501 207 0 44 350 78 ]
C [ 75 48 314 66 1411 85 422 302 437 149 0 41 337 1392 ]
G [ 605 1188 364 70 44 157 558 250 400 39 1545 11 267 11 ]
T [ 244 153 270 74 58 221 372 513 207 1150 0 1449 591 64 ]

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages