Detailed information of deep learning profile BP000790.1

This page shows detailed deep learning-derived predictions and motifs for REST in HL-60 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000790.1
Cell line/tissue: HL-60
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BTF
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.14e-02 2.39e-03 -7.08e-04 4.70e-03 -1.48e-03 -2.35e-05 3.20e-06 1.01e-01 -2.98e-04 1.26e-01 -2.56e-06 -2.30e-03 1.67e-03 6.01e-04 -7.33e-04 ]
C [ 3.85e-03 5.17e-02 3.16e-02 1.23e-02 1.60e-03 1.66e-05 0.00e+00 -9.23e-05 8.50e-02 7.42e-06 -8.89e-06 6.03e-02 -3.15e-04 3.36e-02 4.23e-02 ]
G [ 3.29e-03 -8.59e-04 1.54e-02 4.56e-04 -7.38e-04 1.38e-01 1.50e-01 -2.72e-05 1.39e-03 0.00e+00 1.49e-01 -8.67e-04 1.86e-02 1.93e-03 -3.71e-04 ]
T [ -9.52e-04 3.17e-03 -7.93e-04 2.33e-03 4.39e-02 1.24e-05 7.49e-05 -4.71e-05 -1.31e-04 -1.22e-05 0.00e+00 -2.01e-04 1.41e-02 -1.24e-03 9.87e-04 ]

Frequency matrix

A [ 3089 1163 996 1560 727 61 103 6143 199 6454 48 778 1764 1081 892 ]
C [ 1156 3113 2586 2170 579 14 4 194 5336 14 3 4502 166 3570 4158 ]
G [ 1439 954 1918 978 549 6408 6379 28 735 13 6439 351 2213 1395 227 ]
T [ 810 1265 994 1785 4639 11 8 129 224 13 4 863 2351 447 1217 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
Showing 10 profiles of page 2 from 3 pages