Detailed information of deep learning profile BP000790.1

This page shows detailed deep learning-derived predictions and motifs for REST in HL-60 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000790.1
Cell line/tissue: HL-60
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BTF
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.14e-02 2.39e-03 -7.08e-04 4.70e-03 -1.48e-03 -2.35e-05 3.20e-06 1.01e-01 -2.98e-04 1.26e-01 -2.56e-06 -2.30e-03 1.67e-03 6.01e-04 -7.33e-04 ]
C [ 3.85e-03 5.17e-02 3.16e-02 1.23e-02 1.60e-03 1.66e-05 0.00e+00 -9.23e-05 8.50e-02 7.42e-06 -8.89e-06 6.03e-02 -3.15e-04 3.36e-02 4.23e-02 ]
G [ 3.29e-03 -8.59e-04 1.54e-02 4.56e-04 -7.38e-04 1.38e-01 1.50e-01 -2.72e-05 1.39e-03 0.00e+00 1.49e-01 -8.67e-04 1.86e-02 1.93e-03 -3.71e-04 ]
T [ -9.52e-04 3.17e-03 -7.93e-04 2.33e-03 4.39e-02 1.24e-05 7.49e-05 -4.71e-05 -1.31e-04 -1.22e-05 0.00e+00 -2.01e-04 1.41e-02 -1.24e-03 9.87e-04 ]

Frequency matrix

A [ 3089 1163 996 1560 727 61 103 6143 199 6454 48 778 1764 1081 892 ]
C [ 1156 3113 2586 2170 579 14 4 194 5336 14 3 4502 166 3570 4158 ]
G [ 1439 954 1918 978 549 6408 6379 28 735 13 6439 351 2213 1395 227 ]
T [ 810 1265 994 1785 4639 11 8 129 224 13 4 863 2351 447 1217 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000383.1 REST ENCSR867WPH liver Homo sapiens
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages