Detailed information of deep learning profile BP000790.1

This page shows detailed deep learning-derived predictions and motifs for REST in HL-60 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000790.1
Cell line/tissue: HL-60
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BTF
Model: BPNet

Contribution weight matrix (CWM)

A [ 9.87e-04 -1.24e-03 1.41e-02 -2.01e-04 0.00e+00 -1.22e-05 -1.31e-04 -4.71e-05 7.49e-05 1.24e-05 4.39e-02 2.33e-03 -7.93e-04 3.17e-03 -9.52e-04 ]
C [ -3.71e-04 1.93e-03 1.86e-02 -8.67e-04 1.49e-01 0.00e+00 1.39e-03 -2.72e-05 1.50e-01 1.38e-01 -7.38e-04 4.56e-04 1.54e-02 -8.59e-04 3.29e-03 ]
G [ 4.23e-02 3.36e-02 -3.15e-04 6.03e-02 -8.89e-06 7.42e-06 8.50e-02 -9.23e-05 0.00e+00 1.66e-05 1.60e-03 1.23e-02 3.16e-02 5.17e-02 3.85e-03 ]
T [ -7.33e-04 6.01e-04 1.67e-03 -2.30e-03 -2.56e-06 1.26e-01 -2.98e-04 1.01e-01 3.20e-06 -2.35e-05 -1.48e-03 4.70e-03 -7.08e-04 2.39e-03 4.14e-02 ]

Frequency matrix

A [ 1217 447 2351 863 4 13 224 129 8 11 4639 1785 994 1265 810 ]
C [ 227 1395 2213 351 6439 13 735 28 6379 6408 549 978 1918 954 1439 ]
G [ 4158 3570 166 4502 3 14 5336 194 4 14 579 2170 2586 3113 1156 ]
T [ 892 1081 1764 778 48 6454 199 6143 103 61 727 1560 996 1163 3089 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages