This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000792.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR287UXS |
| Model: | BPNet |
| A [ | -1.26e-03 | -3.69e-03 | -2.86e-03 | -8.80e-05 | -4.68e-04 | 9.60e-03 | -4.43e-04 | -1.79e-04 | -2.15e-03 | 1.95e-02 | -1.82e-03 | -5.02e-03 | -6.36e-04 | -2.54e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.23e-02 | 5.43e-02 | -9.22e-04 | 1.11e-01 | 1.63e-01 | 5.16e-02 | 6.17e-02 | 1.73e-01 | 2.67e-04 | -2.18e-03 | 1.17e-02 | 5.37e-03 | -3.43e-04 | -2.02e-03 | ] |
| G [ | 3.33e-02 | -5.57e-04 | 9.24e-02 | 2.21e-05 | -5.40e-05 | -2.63e-04 | -1.94e-04 | -1.99e-05 | -2.42e-04 | 1.32e-02 | 5.54e-02 | -7.25e-04 | 1.65e-01 | 8.23e-02 | ] |
| T [ | -3.17e-03 | 1.04e-02 | -3.42e-03 | -1.35e-03 | -6.51e-04 | -3.78e-03 | 2.21e-02 | -3.74e-04 | 7.26e-02 | -4.79e-03 | -1.94e-03 | 2.58e-02 | -9.43e-04 | -1.83e-03 | ] |
| A [ | 3661 | 1840 | 2841 | 3021 | 317 | 14149 | 271 | 67 | 1881 | 13924 | 1135 | 4833 | 150 | 2505 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11984 | 16773 | 945 | 32319 | 36050 | 19893 | 20782 | 36715 | 2374 | 2836 | 12913 | 4838 | 112 | 2109 | ] |
| G [ | 17602 | 1607 | 28448 | 880 | 100 | 1046 | 200 | 17 | 851 | 14438 | 20813 | 1242 | 36254 | 28747 | ] |
| T [ | 3690 | 16718 | 4704 | 718 | 471 | 1850 | 15685 | 139 | 31832 | 5740 | 2076 | 26025 | 422 | 3578 | ] |
