Detailed information of deep learning profile BP000793.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000793.1
Cell line/tissue: HeLa-S3
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR000ECW
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.17e-03 -2.13e-03 -3.83e-05 7.44e-02 -8.29e-05 8.29e-04 -5.14e-05 1.58e-05 4.14e-02 -5.32e-04 ]
C [ -8.31e-04 2.35e-03 1.22e-01 -2.83e-04 5.66e-02 1.28e-03 2.19e-05 3.41e-05 -5.28e-04 4.22e-02 ]
G [ 1.69e-02 -1.08e-03 1.25e-05 1.03e-04 1.20e-03 9.19e-02 -9.71e-06 1.28e-01 2.50e-04 -5.71e-04 ]
T [ -3.24e-03 1.10e-02 7.99e-06 -3.92e-04 6.49e-03 2.48e-06 9.33e-02 -5.89e-06 -7.95e-04 4.21e-03 ]

Frequency matrix

A [ 8824 3736 307 26690 442 3062 370 7 17562 1647 ]
C [ 5066 9065 29541 984 16431 2543 188 23 3706 17563 ]
G [ 13032 5263 48 668 3598 24246 220 29779 6231 3299 ]
T [ 2999 11856 24 1578 9449 69 29142 111 2422 7412 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000226.1 USF2 ENCSR000EHG K562 Homo sapiens
BP000417.1 USF2 ENCSR145QNL HepG2 Homo sapiens
BP000448.1 USF2 ENCSR000EEF HepG2 Homo sapiens
BP000548.1 USF2 ENCSR563FBT A549 Homo sapiens
BP000554.1 USF2 ENCSR359NFW K562 Homo sapiens
BP000809.1 USF2 ENCSR000DZU GM12878 Homo sapiens
BP000863.1 USF2 ENCSR578KEN K562 Homo sapiens
BP000966.1 USF2 ENCSR000ECD H1 Homo sapiens
BP001081.1 USF2 ENCSR945NFL SK-N-SH Homo sapiens
BP001168.1 USF2 ENCSR229QAN WTC11 Homo sapiens
Showing 10 profiles of page 1 from 2 pages